Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01234
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Entry
SPHFLASMR4Y_01234 CDS
T04949
Symbol
phrA
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_01234 (phrA)
Enzymes [BR:
sfla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SPHFLASMR4Y_01234 (phrA)
DNA repair and recombination proteins [BR:
sfla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SPHFLASMR4Y_01234 (phrA)
Prokaryotic type
SPHFLASMR4Y_01234 (phrA)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Usp
Motif
Other DBs
NCBI-ProteinID:
ASK88000
UniProt:
A0A220W5A9
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All DBs
Position
complement(1288648..1290039)
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AA seq
463 aa
AA seq
DB search
MTKPKIIWFRRDLRLADQAAVAAAASSGPVIPVYILDDETPRHRIMGGASRWWLHRSLED
LEACLQALGSRLILRQGPAAEHLAEIVKSTGADEIHALHHYEPWWINAERMLEKSLGDEA
QLILHDGNYLLPPGTVTTGAGTPYKIYTPFWKALRQHMPPGEAAPAPDSLVTPESWPDSD
ALEDWSLLPSKPDWAAAFGDHWKPGSAGAEDNLEDFADKAAAYDEGRNLPSEELVSRLSP
HLHFGEISPATVWNRLAEQGSKVETYLKELVWRDYAQNVIEQFPQYGGESYREKMRALPW
RELSDDAVKADFEAWCQGRTGYPIVDAGMRELWVTGWMHNRVRMIAASFLIKHLLIDWRE
GERWFWDTLVDADYASNSVNWQWVSGTGVDSNMFVRIMAPLSQSEKFNAGDYIRRWVPEL
ADIGDPYIHDPEDHGCKPSDYPAKIIGHKESRQRALDAYAKVK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacccaaaattatctggttccgccgcgaccttcgtctggccgatcaagctgcc
gttgctgctgccgcatcaagtggtccggtcatcccggtctatattctcgacgatgaaacg
cccagacaccgcatcatgggcggcgcttcgcgctggtggctgcaccggtcattggaagat
ttggaagcatgtttgcaggctttgggatcacgtctgatcctgcgtcaggggccggccgca
gagcatttggccgaaattgtcaaatcgaccggtgcggatgaaatccatgcgctgcaccat
tacgagccctggtggatcaatgccgaacgaatgttggaaaagtctctcggcgacgaagcc
cagctgatcctgcatgatggcaattatctgttgccgcccgggaccgtgaccaccggggct
ggcacgccctataaaatctacacgccgttctggaaggcgttgcgccagcatatgccgccg
ggggaagccgctccggcgcccgatagtctggtaacaccggagagctggccggacagcgat
gcgctggaggattggagcctgttgcccagcaagcccgactgggccgccgcttttggcgac
cattggaaacccgggtcggcgggcgcggaggataatctcgaggattttgccgataaggcg
gcggcctatgacgagggccgcaatctgccgtccgaagagctggtctcccgcttgtcgccg
catctgcattttggcgagatcagccccgccaccgtctggaaccggctggcggagcagggc
agcaaggtggaaacctatctcaaggagctggtctggcgcgactatgcgcaaaatgtgatc
gaacagttcccgcaatatggcggcgagagctatcgcgagaaaatgcgcgcgctgccgtgg
cgggaattgagcgatgatgcggtgaaggccgatttcgaggcctggtgtcagggccggacc
ggctatccgatcgtcgacgccggaatgcgcgaattatgggtgaccggctggatgcacaat
cgcgtgcggatgatcgcggcgagttttctgatcaagcatctgctgatcgactggcgcgag
ggcgagcgatggttctgggacacgttggtcgacgccgactacgcctccaacagcgtcaac
tggcaatgggtgtcgggcaccggcgtcgacagcaatatgttcgtccggatcatggcgccg
ctcagccagtcggagaaattcaatgccggggactatatccggcgatgggtgcctgaactg
gcggatattggcgatccttatattcacgatccggaggaccatggctgcaagccgtcggat
tatcccgccaagatcatcggccacaaggaatcgcggcaacgcgcccttgatgcatatgcg
aaggtcaaataa
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