Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01264
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Entry
SPHFLASMR4Y_01264 CDS
T04949
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00260
Glycine, serine and threonine metabolism
sfla00460
Cyanoamino acid metabolism
sfla00630
Glyoxylate and dicarboxylate metabolism
sfla00670
One carbon pool by folate
sfla00680
Methane metabolism
sfla01100
Metabolic pathways
sfla01110
Biosynthesis of secondary metabolites
sfla01120
Microbial metabolism in diverse environments
sfla01200
Carbon metabolism
sfla01230
Biosynthesis of amino acids
sfla01240
Biosynthesis of cofactors
sfla04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SPHFLASMR4Y_01264 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SPHFLASMR4Y_01264 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPHFLASMR4Y_01264 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SPHFLASMR4Y_01264 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SPHFLASMR4Y_01264 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SPHFLASMR4Y_01264 (glyA)
Enzymes [BR:
sfla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SPHFLASMR4Y_01264 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ASK88030
UniProt:
A0A220W5D9
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All DBs
Position
complement(1315713..1317020)
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AA seq
435 aa
AA seq
DB search
MSNVADIQDIRQTGFFDFSVDESDPAVAGAINSELARQQNQIELIASENIVSKAVLQAQG
SVFTNKYAEGYPGRRYYQGCAPSDDVETLAIERAKQLFDCGYANVQPHSGAQANGAVMLA
LVKPGDTILGMSLDAGGHLTHGAKPAQSGKWFNAIQYGVNDDDHLINYEEVEALAKEHQP
KLIIAGGSAYPREIDFAKFRAIADAVGAIFMVDMAHFAGLVAAGLHPSPLDHAHVVTTTT
HKTLRGPRGGMILTNDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKSYCA
AVIENAKVLAATLKERGADVVAGGTDTHLALIDLSPLGITGRDADEALERAGITCNKNSI
PNDPQPPMKTSGIRVGSPAGTTRGFGPAEFRLIGDMVADVLDGLREKGESGDPAVEADVR
ERVQELCDRFPIYQD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgttgcagatatacaggatatccgccagaccggatttttcgatttctcggtc
gatgaaagcgatccggcggttgccggtgcgatcaactccgaactggcgcgccagcagaac
cagatagagctgatcgcgtcggagaatatcgtttccaaggccgtgctgcaggcgcagggg
tcggtcttcaccaacaaatatgccgagggctatcccggccgccgctattatcagggctgc
gcgccgtctgatgatgtagagacgctggcgatcgaacgtgccaagcaattgtttgattgc
ggttatgccaatgtccagccgcattcgggagcacaggccaatggtgcggtgatgctggcg
ctggtcaagccgggcgacaccattcttggcatgtcgctcgatgccggcggccatctgacc
catggcgcgaaaccggcgcaatcgggcaaatggttcaacgccatccaatatggcgtcaat
gacgatgatcacctgatcaactatgaagaagtcgaggcgctggccaaggagcatcagccg
aagctgatcatcgccggtggttctgcctatccgcgcgagattgatttcgccaagttccgt
gcgattgccgacgctgttggtgcgatcttcatggtcgatatggcgcatttcgccggtctg
gtggccgccgggctgcaccccagcccgctggatcacgcccatgttgtcaccaccaccacg
cacaagaccctgcgtgggccacgcggcggcatgatattgaccaatgacgaagccattgcc
aagaagatcaattctgctgtatttccgggtctgcagggcggccccctgatgcacgtgatt
gcggccaaggcggttgcctttggcgaggcgctgcgtccggaattcaaaagctattgtgcg
gctgtcattgaaaatgcaaaagtgcttgcggcgacgctcaaggaacgcggcgccgatgtg
gtcgccggtggcaccgacacccatctcgcgctgatcgatctgtcgccgcttgggatcacc
gggcgcgatgccgacgaagcgctggaacgggccgggattacctgcaacaagaacagcatt
cccaatgatccgcagccgccgatgaagaccagcggcattcgcgtgggatcgcctgccggg
accacccgcggcttcggtccggcggaattccggctgatcggggacatggtcgccgatgtg
ctcgacggcctgcgcgaaaaaggggagagcggtgatccggctgtggaagccgatgttcgt
gaacgggtgcaggagctttgcgaccgtttcccgatctatcaggattga
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