Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01378
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Entry
SPHFLASMR4Y_01378 CDS
T04949
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00250
Alanine, aspartate and glutamate metabolism
sfla00310
Lysine degradation
sfla00350
Tyrosine metabolism
sfla00650
Butanoate metabolism
sfla00760
Nicotinate and nicotinamide metabolism
sfla01100
Metabolic pathways
sfla01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SPHFLASMR4Y_01378 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SPHFLASMR4Y_01378 (gabD)
00310 Lysine degradation
SPHFLASMR4Y_01378 (gabD)
00350 Tyrosine metabolism
SPHFLASMR4Y_01378 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SPHFLASMR4Y_01378 (gabD)
Enzymes [BR:
sfla01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SPHFLASMR4Y_01378 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SPHFLASMR4Y_01378 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SPHFLASMR4Y_01378 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ASK88141
UniProt:
A0A220W5P3
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Position
1436610..1438076
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AA seq
488 aa
AA seq
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MTDLDLSRPDLLRSQCYINGTWVNADSGEKFAVTNPATGTQIGEVPDAGVSETRKAIDAA
QKAQPGWAARTAKERALILRRLFELMMKHQEDLARIMTAEQGKPLAESRGEIGYAANFIE
WFAEEGKRVYGDVIPTHAADKRILVLKQPIGVCAAITPWNFPAAMITRKIGPALAAGCAI
VVKPAEHTPLSALALCVLAEEAGIPPGILSCVTGDAATIGGELTSNPVVRKLSFTGSTDV
GKLLMRQCADNVKKVSLELGGNAPFIVFDDADVEAAVAGAIAAKFRNAGQTCVCTNRFLV
QNGIYDRFVEKLAAATAALTVGNGTQDGIDIGPLIDRDAMAKVQDHLDDAKTKGATIMTG
GAAPDKGELFFNPTVIAGATTAMKISREETFGPLAAVFRFETEAEAIAMANDTESGLSAY
FYTQDLGRCWRVAEALEYGIVGINEGIISTEVAPFGGIKESGIGREGSKYGIEDYLEIKY
MLIGGLGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacctcgacctatcccgcccggacctgctgcgcagccaatgctatatcaacggg
acttgggtgaacgccgattcaggcgagaaatttgccgtcaccaaccccgccaccggaacg
caaattggcgaagtccccgatgccggcgtatccgaaacccgcaaggcaattgacgcggct
cagaaggcccagcctggctgggcagcaagaacagcgaaggagcgcgccctaatattgcga
cggttgttcgaactgatgatgaaacatcaggaagacctggcgcggatcatgacggccgaa
caaggcaaaccgcttgccgagagccgcggcgaaatcggctatgccgcaaatttcatcgag
tggttcgcggaggaaggaaaacgcgtttacggcgatgtgatcccgacccatgccgcggac
aagcgaattctggttctgaaacagccaatcggtgtctgcgccgcaatcacgccatggaat
tttcccgccgccatgatcacgcgcaagatcggccccgctctggcggctggctgtgccatc
gtggtaaagccggctgaacatacccccctgtccgctctcgcactgtgcgtgcttgcagaa
gaagccggaattccgcccggaatattgtcctgcgtcaccggggatgcggcgacgatcggc
ggggaactgacatccaatccggtggtccggaaattgtcgttcaccggttcgacggacgtc
ggcaagttgctgatgcggcaatgcgctgacaatgtgaagaaagtgtcactggaactgggt
ggcaatgctccgtttatcgtgttcgatgacgccgacgtcgaagccgcagtagccggagcg
attgcggccaagttccgtaacgccggacaaacctgtgtctgcaccaaccgttttctggtg
cagaacggaatatatgacaggttcgtggaaaagcttgcggctgccaccgcagcgctcacc
gtcggtaacggaacgcaggacggcatcgatattggccccctgatcgatcgcgatgcaatg
gccaaggtccaggaccatctcgacgatgccaagaccaagggtgctaccataatgaccggc
ggcgcagcgcccgacaagggcgagctgtttttcaatccgacagtgattgccggagcgacg
accgcgatgaagatttccagggaggaaacctttggccctctcgcagctgttttccggttc
gaaaccgaagctgaggcaattgctatggccaatgatacggaatcgggcctttccgcctat
ttctatacccaggacttgggccggtgctggcgagtggccgaagcgctggaatatggaatt
gtcgggatcaacgaaggcataatatcgaccgaagttgcgccctttggcgggatcaaggag
agcggtatcggccgggaaggttccaaatatggtatcgaggactatctggaaatcaaatat
atgctgatcggtggtctgggattgtaa
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