Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01517
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Entry
SPHFLASMR4Y_01517 CDS
T04949
Symbol
tamB
Name
(GenBank) translocation and assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfla02000
]
SPHFLASMR4Y_01517 (tamB)
Transporters [BR:
sfla02000
]
Other transporters
Pores ion channels [TC:
1
]
SPHFLASMR4Y_01517 (tamB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ASK88266
UniProt:
A0A220W634
LinkDB
All DBs
Position
complement(1573481..1577650)
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AA seq
1389 aa
AA seq
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MTETGDNSRSRLPIWRWSLRGLFGLAAIVLLGLVGGAMWLDSDSGHRFIIDQVEALEPED
GLRIRIADIEGSIYGEGKVQGLRLLDPRGEFFSAGTVAVDWNPLAWIFNELNISEALVLK
GRLDRLPELIDSGEDSPLLPGFDMYVGAFRAENLALGEAIAGSEQFANLSGSADIRAGRA
MVRLDAATTRSGDKLLLALNAEPERQKLDIDAEIIAPAGGAIAAALGMDRDLAVTLKGDG
SWQKWDGELIALSNAQTLVQATIEAKDGQFSYDGKLTASVLPAGAAQRLASPDLLINGTA
SLADRIVALDLQARSAALSFTATGGIDLARNSLDAMRLEARLADPSALAANMRAQDFELK
ALLNGKLSRLRYQYLLTAPQLALGKTLLTNVRGEGEGQRDAGGWDIPVKLSVGTVIGNGE
LLKQLLSGFSATALLRYEKDLLFAERARVATNAAKGTLDLELRPSTGDFALDIDANAPGF
AVQGVGVADIVAAINLRPAPTGLALDGQVNASMRRFDIGFLRELAGGLPQLQTGLALGPD
GLLRFTNLDVSAPKLSFRGSGRQTGAATFTFRGSGRQDSYGRFDLKLDGALDRPRLALLL
DSPLPAAGLSAVSLQLDPVKGGFSYVASGGSTLGPFSSDGMILTTPGQDTAVRVDRLLVS
DTLASGTIRTTADGLAGRLAVSGGGVDGDILFRPGNGQQLIRAKLEAENARFGGEPPIFI
RTAVVDADIVLIDGQSNIDATLRAQGISRGELIIGRVAANAKLTDGSGSATFTVAGTRGS
TFEFQAKADITPARYRISGTGQFEGRNLRLAQPLELRRVDDGWTVSATTINYGRGSARLS
GRWGSGDSRLDLSLAKMPLSLIDIGYPDLGLGGNVNGTVKLTQSGARMPVGEARLTVKGL
TRSGLILTSAPVDLGLNIALSSRNAAARGIIKSPEGQTIGRFQGRVTGLGSGNWQDELIR
RPLFAQARFNGGAESLWRLTGVETFDLTGPVAASADVSGSLANPQIRGQVRTSNARLESP
LTGTVISNIRTVGQFDGSRLVLPELTGTTAGGGTVSGSGSFNFAVAPGEGIGITMDVNAE
QAALIARDDFAATVTGPIKIRSSVNGGLISGDVLLNRSYFRFGRASATASLPDIKTREIN
RRADERPVVTRSRPWQFALTAKAPNRLRVEGLGLDSEWGADLRISGPVDNFAMVGTANLI
RGNYTFAGRRFTLQRGAIRFVGNQPVNPTLDIEAEANLTGLNATINVTGTGNQPEIAFTS
IPALPEDELLSRILFGASIADLSAPEAVQLAAAVASLNSGGGLDPINQLRKAVGLDRLRI
LPSDTDTGTGTSIAAGKYITRRVYVELITDGKGYSATQLEFQITRWLSILSSISTLGRQS
ANVRVSKDY
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaccggggacaatagccgctccaggctgccgatctggcgctggtccctgcgc
ggcctgttcgggcttgcggcgatcgtcctgctcggcctggttggcggggcaatgtggctg
gacagcgattccggccatcgtttcatcattgaccaggtcgaggcgctggaacctgaggac
ggtctgcgtatccggatcgcggacatcgaagggtcaatatacggcgaaggcaaggtgcag
ggattgcgcctgctcgatcccaggggcgagtttttttccgccggtaccgtggcggtcgac
tggaacccgctggcctggattttcaacgagctgaatatttccgaagcgctggtgctgaag
gggcggcttgatcgcttgccggaactgatcgatagtggcgaggacagtcccttgctcccc
ggtttcgatatgtatgtcggtgcctttcgcgccgagaatctggcgctcggggaagccatt
gcgggcagcgagcaatttgccaatctgtccggttctgctgatatcagggccggtcgggcg
atggtgcgcctggacgccgccacgacgcgcagcggcgacaagctgctgctcgcgctgaac
gcggaacccgaacgccagaagctcgatatcgatgccgaaatcatcgctcctgccggtggc
gcgatagccgctgctctgggcatggatcgcgaccttgcggtgaccctgaaaggcgatggc
agctggcaaaaatgggatggcgaactgatcgcgctcagcaacgcgcagacgctggtgcaa
gccacgatcgaggcgaaggacggacagttttcctatgatggcaagctgaccgcttccgtg
ctcccggcaggggcggcgcaaaggctcgcatcgcccgatctgctgataaatggcacggca
agtctggcggaccggattgtggcgctcgaccttcaggcgcgttccgctgccttgtccttc
accgcgacgggcgggatcgatctggcccgcaacagtctggatgcgatgcggctggaggca
cgtctcgccgatccatccgcgctggccgcaaacatgagagcgcaggatttcgagctgaaa
gcgctgctcaacggcaagctatcccgcttgcgctatcaatatctgctgaccgcgccgcaa
ctggccttgggcaagaccttgctgaccaatgtccgcggcgagggcgaagggcagcgcgat
gccggcggctgggacattccggtgaagctttcggtcgggacggtgatcgggaatggcgaa
ttgctgaagcaattgctttccggcttcagcgcgaccgccttgcttcgctacgagaaggat
ctgctgttcgccgagcgggcgagggtggcgaccaatgcggcgaagggcacgctggatctg
gagctgcgtccctcgaccggcgattttgccctggatatcgatgccaatgcgcccggtttt
gcagtgcagggcgtcggggttgccgatatcgtggccgcgataaatctgcgtccggccccg
accgggctcgccctggacggccaggtcaatgccagcatgcggcgattcgacatcggcttc
ttgcgcgaactcgccgggggcctcccgcaattgcagaccggcctcgcgcttggaccggac
gggctgctgcgtttcaccaatctcgacgtgtcggctccgaaactctctttccggggatcg
ggccgtcagaccggggcggcgacctttaccttccgcggatcgggcaggcaggacagctat
ggccgctttgacctgaaactcgacggagctcttgaccggcccaggctagcgctgttgctc
gacagcccgctgccggcggctgggctctcggcagtcagcctgcagcttgatccggtcaag
ggtggattctcctatgtcgcttccggcggatcgacgctgggaccgttcagcagcgacggg
atgatcctgaccacgccgggccaggacaccgcggtacgggtcgaccgcttgctggtctcc
gacacgctggccagcggcacgatccggacaaccgccgacggcctggccggcaggctcgcg
gtcagcggtggcggggtggatggcgatatcctgttccgccccggcaacggacagcagctg
atccgtgccaaactcgaggcggaaaatgcgcggttcggcggcgagccaccgatcttcatc
cgcaccgccgtggtggacgcagatatcgtgctgatcgacggccagtccaatatagacgcc
actctccgggcccaggggatcagccgtggcgagttgatcatcggccgggtcgccgccaat
gccaagctgaccgacggcagcggttcggcaaccttcactgtcgccgggacacgcggcagc
acttttgaatttcaggccaaggccgatatcacgccggcccgctaccggatctccggcacc
ggacagtttgaaggccgcaacctgcgtctcgcgcagccgctcgaactgcggcgggttgac
gatggctggaccgtctcggcaaccacgatcaactatggacgcggcagtgccaggctgtcc
ggtcgctggggcagcggcgattccaggctggacctgtcattggcgaagatgccgctgtcc
ctgatcgacatcggctatcccgatctcgggctgggcggcaatgtaaacggcacggtcaag
ctgacccagtcgggtgcgcggatgccggtcggcgaagccagactcacggtcaaggggctg
acccgctccggtctgattctcacgtctgcgccggtcgatcttggcctcaatattgcgctt
tccagtcgcaacgcagcggcgcgtggcatcatcaagtcccccgaaggccagaccattggc
cggttccaggggcgagtgaccggtcttggcagcggcaactggcaggatgagctgatccgc
aggccgctatttgcgcaagcgcggttcaatggcggtgccgaaagcctgtggcggcttact
ggtgtcgaaaccttcgacctgaccggtccggtcgccgccagcgccgatgtcagcggcagt
ctcgccaatccgcaaatcaggggacaggtgcgcaccagcaacgcgcggctcgaaagcccg
ctcaccggtaccgtcatttccaacatccggacggtgggccagttcgacggctcgcggctg
gtgctgccggaattgaccggcaccacggcgggaggcggcacggtcagcggcagtggcagt
ttcaacttcgcggtcgcgccgggtgagggcatcggcatcacgatggacgtcaatgccgaa
caggccgcgctgatcgcccgcgatgatttcgccgccacggtgaccgggccgatcaaaatc
cgcagctcggtcaatggtggcctgatttccggcgatgtgctgctcaaccgcagctacttc
cggttcggccgggccagcgcgacggccagcctgccggatatcaagacccgcgagatcaac
cggcgcgcggatgaacggccggtcgtaacccgcagccgcccctggcaattcgcgctgacc
gccaaggcaccgaaccgcctgcgggttgaaggtctggggctggacagcgaatggggcgcc
gacctcaggatttccgggccggtcgacaatttcgcgatggtcggcaccgccaatctgatc
cgcggcaattatacgttcgccggccggcgcttcacgctacagcgcggcgccatccgcttc
gtcggcaaccagccggtcaatccgactctggacatcgaggccgaagccaatctgaccggc
ctcaacgcaacaatcaatgttaccggcaccggcaaccagccggagatcgcgttcaccagc
atcccggctctgcccgaggatgaattgctgtcgcgcatattgttcggcgcttcgatcgcc
gacctgtccgctcctgaagcggtccagcttgccgcagccgtggcttcgctgaacagcggt
ggcggccttgatccgatcaatcagctgcgcaaggcggtcggtctggaccggttgcggata
ttgccttccgacaccgacaccggtaccggcacatcgattgccgctggcaaatatatcacc
cgccgggtctatgtcgaactgatcaccgacggcaagggctatagcgctacccagctggaa
ttccagatcacccgctggctgtcgatcctgtcgagtatttcgaccctcggccggcaaagc
gccaatgtgcgggtgagcaaggattattga
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