Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01625
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Entry
SPHFLASMR4Y_01625 CDS
T04949
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPHFLASMR4Y_01625 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_01625 (alkA)
Enzymes [BR:
sfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SPHFLASMR4Y_01625 (alkA)
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPHFLASMR4Y_01625 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ASK88372
UniProt:
A0A220W6D5
LinkDB
All DBs
Position
1689848..1690465
Genome browser
AA seq
205 aa
AA seq
DB search
MGLSKEGIKAGLDHAAAVEPRLAAAIETSGYPEPRIRPEGYETLLRTIVGQQVSVASAAA
VWNKLEARLGDGCPPEALLATEFDELRACGLSRQKQGYARSLAELILSGGVDLGNLPQDD
EEAIALLTRIRGIGRWSAEIYLLFAQGRPDIWPAGDLAIQVGVGDFLGLPERPSEKDVRD
IAQSWSPHRGAVAIFTWHHYHVMVM
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggcctatcaaaagaaggaatcaaagcgggtctcgaccatgccgctgccgtcgaaccc
cggctggcggccgccattgaaacgtccggctatcccgagccgcgcatccggccggaaggc
tatgaaactttgctccgcaccatagtcggacagcaggttagcgtggcatcggcagcggcg
gtctggaacaagctggaggcgcggctgggcgacggctgtccccccgaggcgctgcttgcc
acggaatttgacgaactgcgcgcctgcgggctttcgcggcagaaacagggctatgccaga
agccttgcggagctcattctctccggtggagtggatctcggaaatttgccgcaggatgat
gaagaggcgatcgcgctgctcaccagaataaggggcattggccgatggtcagcggaaatc
tatctgctgttcgcgcagggccgcccggatatctggccggcgggtgatcttgcgatacag
gtcggcgtcggagattttctcggcctgccggagcgcccttcggaaaaggacgttcgagac
atcgcgcaaagctggtccccgcatcgcggcgccgtcgcgattttcacctggcaccattat
catgtgatggtgatgtag
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