Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_01889
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Entry
SPHFLASMR4Y_01889 CDS
T04949
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00128
aldehyde dehydrogenase (NAD+) [EC:
1.2.1.3
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00010
Glycolysis / Gluconeogenesis
sfla00053
Ascorbate and aldarate metabolism
sfla00071
Fatty acid degradation
sfla00280
Valine, leucine and isoleucine degradation
sfla00310
Lysine degradation
sfla00330
Arginine and proline metabolism
sfla00340
Histidine metabolism
sfla00380
Tryptophan metabolism
sfla00410
beta-Alanine metabolism
sfla00561
Glycerolipid metabolism
sfla00620
Pyruvate metabolism
sfla00625
Chloroalkane and chloroalkene degradation
sfla00770
Pantothenate and CoA biosynthesis
sfla00903
Limonene degradation
sfla01100
Metabolic pathways
sfla01110
Biosynthesis of secondary metabolites
sfla01120
Microbial metabolism in diverse environments
sfla01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SPHFLASMR4Y_01889 (gabD)
00053 Ascorbate and aldarate metabolism
SPHFLASMR4Y_01889 (gabD)
00620 Pyruvate metabolism
SPHFLASMR4Y_01889 (gabD)
09103 Lipid metabolism
00071 Fatty acid degradation
SPHFLASMR4Y_01889 (gabD)
00561 Glycerolipid metabolism
SPHFLASMR4Y_01889 (gabD)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SPHFLASMR4Y_01889 (gabD)
00310 Lysine degradation
SPHFLASMR4Y_01889 (gabD)
00330 Arginine and proline metabolism
SPHFLASMR4Y_01889 (gabD)
00340 Histidine metabolism
SPHFLASMR4Y_01889 (gabD)
00380 Tryptophan metabolism
SPHFLASMR4Y_01889 (gabD)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SPHFLASMR4Y_01889 (gabD)
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
SPHFLASMR4Y_01889 (gabD)
09109 Metabolism of terpenoids and polyketides
00903 Limonene degradation
SPHFLASMR4Y_01889 (gabD)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
SPHFLASMR4Y_01889 (gabD)
Enzymes [BR:
sfla01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.3 aldehyde dehydrogenase (NAD+)
SPHFLASMR4Y_01889 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ASK88635
UniProt:
A0A220W724
LinkDB
All DBs
Position
complement(1939526..1940950)
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AA seq
474 aa
AA seq
DB search
MDSYEQNYINGQWVDSIGGTPHQVINPATEEPGTRIVLGTKADVDAAVAAAKAAFKTFSQ
TSREERLALLERIIAEYKKRMPDIAASLAVEMGAPVSLGNAAQAPAGLGGFMGTLEALKN
FEFSEKVGANSIVYEPIGVVGMITPWNWPLNQITLKVAPALAGGNTMVLKPSEECPGSAA
ILAEVMDAAGVPAGVFNLVQGDGPTVGAAISSHPDVDMVSFTGSTRAGILVAKAAADTVK
RVHQELGGKSPNLVLPGAKLEEVLPPTIAGVMVNSGQSCIAPTRVLVHKDQTNDAIAVVK
NIVESQEVGDPTVEGGHMGPVVNKAQHSKIQDLIQSAIDEGATLETGGTDLPSNVNRGYY
VKPTLFSGVTPDMRIAREEVFGPVVTLMSYDDLDEAIEIANDTEYGLSAVISGDPAAAAD
VAPQLKAGMVIVNNWGPAPGLPFGGYKQSGNGREGGVYGLRDFMEMKSVTGLPS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggatagttacgaacagaattacatcaacggccaatgggtcgattctatcggaggcacg
ccgcaccaggtcatcaatccggccaccgaagagccaggcaccaggattgttcttggtacc
aaggccgatgttgatgccgccgttgccgcagcgaaagccgcgttcaagacgttcagccag
acctcgcgcgaggagcggctcgcgctactcgagcggatcatcgcggaatataagaagcgc
atgccggatattgctgcctctctggcggtcgaaatgggcgcgccggtcagtctcggcaat
gccgcgcaggcgcccgccggccttggcggattcatgggcacgctggaagctttgaaaaat
ttcgagttctcggaaaaagtcggcgccaacagcattgtctatgaaccgattggcgtggtc
ggcatgatcacgccgtggaactggccgttgaaccagatcaccctgaaagtggctccggct
ctcgcaggtggcaatacaatggtgctcaagccgtccgaagaatgcccgggcagcgccgcc
attctggccgaggtgatggatgctgctggcgtgcctgccggcgtattcaatctggtgcag
ggggacggcccgaccgtgggcgcggcgatctcctcgcatcccgatgtcgatatggtcagc
ttcaccggctcgacccgtgccggcatcctggtggcgaaagccgctgccgacacggtcaag
cgcgtccatcaggaactgggcggcaaatcgcccaatctggtcctgcccggtgccaagctg
gaggaagttctgccaccgaccatcgcaggggtaatggtcaatagcggacaaagctgcatc
gcgccgacccgcgtcctggtgcacaaggaccagacgaacgacgccattgcggtggtcaag
aatattgtggagagtcaggaggttggcgatccaacggtcgagggcgggcatatggggccg
gtggtgaacaaggcccagcacagcaagatccaggatctgatccagtctgcaatcgacgag
ggtgccacgctggaaacgggcggcaccgatctgccctccaatgtcaatcgtggctattat
gtcaagccgacgctgttcagcggcgtgacaccggacatgcggattgccagggaagaggtt
ttcggccccgtggtgacgctgatgagctatgatgatctcgacgaagcgatcgagattgcc
aatgatacggaatatggcctgtccgcagtcatctccggtgatccggccgcggccgctgat
gtcgccccgcaactgaaagcgggcatggtcatcgtcaataactggggaccggctcccggc
ctgccttttggcggctacaaacagtccggcaacggccgcgaaggcggcgtctatggcctg
agggatttcatggaaatgaaatccgtaactggtctgccgagctga
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