Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02101
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Entry
SPHFLASMR4Y_02101 CDS
T04949
Symbol
pdhD
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00010
Glycolysis / Gluconeogenesis
sfla00020
Citrate cycle (TCA cycle)
sfla00260
Glycine, serine and threonine metabolism
sfla00280
Valine, leucine and isoleucine degradation
sfla00310
Lysine degradation
sfla00380
Tryptophan metabolism
sfla00620
Pyruvate metabolism
sfla00630
Glyoxylate and dicarboxylate metabolism
sfla00640
Propanoate metabolism
sfla00670
One carbon pool by folate
sfla00785
Lipoic acid metabolism
sfla01100
Metabolic pathways
sfla01110
Biosynthesis of secondary metabolites
sfla01120
Microbial metabolism in diverse environments
sfla01200
Carbon metabolism
sfla01210
2-Oxocarboxylic acid metabolism
sfla01240
Biosynthesis of cofactors
Module
sfla_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sfla_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfla_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sfla_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SPHFLASMR4Y_02101 (pdhD)
00020 Citrate cycle (TCA cycle)
SPHFLASMR4Y_02101 (pdhD)
00620 Pyruvate metabolism
SPHFLASMR4Y_02101 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SPHFLASMR4Y_02101 (pdhD)
00640 Propanoate metabolism
SPHFLASMR4Y_02101 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPHFLASMR4Y_02101 (pdhD)
00280 Valine, leucine and isoleucine degradation
SPHFLASMR4Y_02101 (pdhD)
00310 Lysine degradation
SPHFLASMR4Y_02101 (pdhD)
00380 Tryptophan metabolism
SPHFLASMR4Y_02101 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SPHFLASMR4Y_02101 (pdhD)
00670 One carbon pool by folate
SPHFLASMR4Y_02101 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfla04147
]
SPHFLASMR4Y_02101 (pdhD)
Enzymes [BR:
sfla01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SPHFLASMR4Y_02101 (pdhD)
Exosome [BR:
sfla04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SPHFLASMR4Y_02101 (pdhD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
Pyr_redox_3
NAD_binding_8
HI0933_like
Lys_Orn_oxgnase
AlaDh_PNT_C
DAO
FAD_binding_2
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ASK88845
UniProt:
A0A220W7N7
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All DBs
Position
2149174..2150655
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AA seq
493 aa
AA seq
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MTNQTVITNSYRPISGAGEFDFDVAIIGAGTAGMAAYREASQYSDRVALIDGGPLGTTCA
RVGCMPSKLLIAAAEAAHAGSRTPMFGVRYDDPAIDGIAVMKRVRGERDRFVGFVTEAVH
GFDKGEIIREYARFEDDHTLRLSSGRKISARTIVIATGSRPAIPQALFAAGERLIVNDDI
FDWTDLPGSVAVFGAGVIGLELGQALHRLGVRVRLFGRGGQAGPLTDPVVRQYATDIFSG
EFPAIWNADTRISRKRDTVAVRWGEAADQEAGFDYLVAATGRRPNIDKIGLENTGLPLGT
TGVPQYDPLSGRVGDTHIFIAGDAALDLPLLHEAADEGRLAGENAARFPHSYRRSRRTPI
GIVFSDPQIAMVGASHASLLARPGCHFATGEVSFEDQGRARVMGLNKGILRLYAEHGSAR
FLGAEMIGPSAEHIAHLLAWSIQANMTVEQILQMPFYHPVLEEGVRTAFRNLNHALGFGP
NPPLQCIDCGPGA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatcaaacggtaatcaccaacagctacaggccgatatctggcgccggtgaattc
gatttcgatgtcgccatcatcggcgctggcacagccggaatggcggcctatcgtgaagct
tcgcaatatagcgatcgcgttgcactgatcgatggcgggccactaggcacaacatgcgcg
cgcgtgggctgcatgccttccaaactcctgatcgcagcagccgaggcagcgcatgcgggg
tccaggactcccatgttcggggtccgatatgacgatccggcgatcgacggcatagccgtg
atgaaacgggtacgtggcgagcgtgaccgctttgtcggttttgtcacagaggctgtccat
ggattcgacaagggcgagataataagggaatatgcccgcttcgaagacgatcacacgctt
cggttgagcagcggacgcaagatttctgcccgcacgatagtcatcgccaccggttcgcgg
cccgccattccccaagcattattcgccgccggcgaaaggctgatcgtcaatgatgatata
tttgactggaccgatctgcccggttcggtcgcggtattcggggctggtgtcatcgggctg
gaattggggcaggccctgcaccggctgggagtgcgcgtgcgtcttttcggaaggggcggt
caggccgggccactaaccgatccagtggtgcgccaatatgcgaccgacattttttctggc
gagtttccggccatctggaacgctgacacccggatttcgcgcaaaagggatactgtcgcg
gtgcgctggggcgaagcggcggatcaggaagccggcttcgactatctggtcgcagccacc
ggtcgcaggcccaatattgataaaatcggtctcgagaataccggcctgccgctcggaacg
acgggcgtgcctcaatatgaccccttgtccggccgcgttggcgacacccatatattcatt
gccggcgatgctgcgcttgacctgccgctgctgcacgaagcggcagatgagggccgcttg
gccggagagaatgcagcgcgctttccgcattcatacagacgatctcgccgcaccccgatc
ggcatcgttttctccgatccgcaaattgctatggtcggggccagccatgcctcgctcttg
gctagaccgggatgccacttcgcgaccggagaagtttcatttgaggaccagggccgtgcc
cgggtgatgggtctcaacaagggcatcctcaggctttatgccgaacacggcagcgcacgg
tttctcggagccgaaatgatcggcccttcagctgaacatatcgcgcatcttctggcctgg
tccattcaggccaacatgaccgtggagcaaatcctgcaaatgccgttttaccatcccgta
ctggaagagggcgtgcgcacagccttcagaaatctgaaccatgctcttggatttggcccc
aatcctccactgcaatgtattgattgcggaccgggagcctga
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