Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02166
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Entry
SPHFLASMR4Y_02166 CDS
T04949
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla03030
DNA replication
sfla03410
Base excision repair
sfla03420
Nucleotide excision repair
sfla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPHFLASMR4Y_02166 (polA)
03410 Base excision repair
SPHFLASMR4Y_02166 (polA)
03420 Nucleotide excision repair
SPHFLASMR4Y_02166 (polA)
03440 Homologous recombination
SPHFLASMR4Y_02166 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfla03032
]
SPHFLASMR4Y_02166 (polA)
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_02166 (polA)
Enzymes [BR:
sfla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPHFLASMR4Y_02166 (polA)
DNA replication proteins [BR:
sfla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPHFLASMR4Y_02166 (polA)
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SPHFLASMR4Y_02166 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPHFLASMR4Y_02166 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DprA_N
HHH_5
HHH_2
CEP170_C
Motif
Other DBs
NCBI-ProteinID:
ASK88910
UniProt:
A0A220W7V7
LinkDB
All DBs
Position
complement(2212408..2215212)
Genome browser
AA seq
934 aa
AA seq
DB search
MTDPTDNKSNHLYLVDGSAYIFRAYHRLPPLTNVRGEPVGAVYGYTTMLWKLADELNKAD
GPTHMAVVLDKAGTSFRNDLYDQYKANRPEAPEDLKPQFPMIRDATRAFSLPLIEEENVE
ADDMIASYTKAALAEGWKVTIVSSDKDLMQLIEPDDDSRVDMLDTMKNARMNRATVEEKF
GVGPEKLGDVLGLMGDSSDNIPGVPGIGPKTAFKLINEYGDIESVLAAAPEMKKSKMREN
LIEFADQARLSRELVTLRDDCPLPDTLESFLIQDIPDGPLRAFLADHGFNSLLRKLGGDG
HAEPQDPDVADDSGAPDAAKLPDAPAIDRSQYECVQDIAALDQWIARATAQGVCAVDLET
DSLESVTARIIGVCLATGPNEACYIPLGHGSGDMFGETPEQIGLEDALAKLKPLLEDDAV
LKVGQNLKYDMGVLAQHDISIAPFDDTLVMSFNLDAGLHGHGMDELSKLHLGHECISFKS
LTGTGKKAIGFAEVPLDKATEYGAEDADVTLRLWEILRLRMVPERATRVYQMVDRPLVPV
IAGMEATGVLVDREELARLSKTFAEEMEKLEAEIHELAGESFSIGSPKQLGEILFGKLGL
KGGKKGKSGQYSTDVTVLERLAGDGEPIAQKVVDWRQLAKLKSTYTDALQEQINPGTGRV
HTSYSLSGAQTGRLSSTEPNLQNIPIRTEIGRQIRQAFVAAPGNVILAADYSQIELRLAA
HIADVETLKEAFANGEDIHNRTARELFGAEDRDARARAKTINFAILYGISRWGLAKRLEV
DADEAQAMIDTYFERFPGINQYISRTLQSVREAGYTETLFGRKTWFERIKSPNQAERQGS
ERAAINAPIQGTSADIIKRAMARMLPALAEAGLHDVRMLMQVHDELVFELPEADVEAASA
VIRSVMSGAAEPAVKLSVPLDVDIGTGKSWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccctacagacaacaaatccaaccatctctatctcgttgacggctcggcctat
attttccgcgcctatcaccgcctgccgccgctgaccaatgtccgcggcgaaccggtcggc
gcagtctatggttatacgacaatgttgtggaaactcgccgacgagctgaacaaggccgac
ggcccgactcatatggcggtggtgctggacaaggcggggaccagtttccgcaatgatctc
tatgaccagtataaggccaaccgcccggaagcgccggaggatctgaagccgcaattcccg
atgatccgtgacgctacgcgcgctttttcgctgcccttgatcgaggaagaaaatgtcgag
gccgacgacatgattgcttcctacaccaaggcggcgctggccgagggctggaaggtgacg
atcgtttcgtccgacaaggatctgatgcagctgatcgagcccgatgacgacagccgggtc
gacatgctcgacacgatgaagaacgcccggatgaaccgcgccacggtcgaggagaaattc
ggggtaggaccggagaagctcggcgatgtgctcggcctgatgggcgacagttcggacaat
atcccaggcgtgccgggcatcggaccgaaaaccgcgttcaaactgatcaacgaatatggc
gatatcgaaagcgtactcgccgccgcgccggagatgaaaaaatccaagatgcgcgagaat
ctgatcgaatttgccgatcaggcacggctgtcgcgggagctggtgaccctgcgcgatgat
tgtcccttgcccgacacgctcgaaagtttcctgatccaggatatccccgacgggccgctg
cgcgcatttctggcggatcacgggttcaacagcctgctccgcaaactgggtggcgacggt
catgccgaaccgcaggatcccgatgtcgccgacgatagcggcgctccggatgccgcaaaa
ttgccggacgccccggcgatagaccgtagccaatatgaatgtgtgcaggatatcgccgcg
ctcgaccagtggatcgcgcgtgcaacggcgcagggcgtctgcgcggtcgatctcgagacc
gacagcctcgaaagcgtgaccgcgcggatcatcggcgtctgtctggccactggtcccaac
gaggcctgctacatcccgctcggccacggcagcggcgacatgttcggcgagacaccggag
cagatcggcctcgaggacgcgctggcgaagctaaagccgctgctcgaggatgacgcggtg
ctgaaggttggacagaatctgaaatatgacatgggcgtattggcccagcatgacatcagc
atcgcaccgtttgacgatacgctggtgatgagcttcaatctcgatgccggcctgcacggc
cacggcatggacgaactcagcaagctgcatctcggccatgaatgtatcagcttcaagtcg
ctcaccggcaccggcaagaaggcgatcggctttgccgaagtgccgctcgacaaggcgacc
gaatatggcgcggaggacgccgatgtcacgctccgcctgtgggaaatattgcgcctgcgg
atggtgccggaacgggcgacccgcgtctatcagatggtcgatcggccgctggtgccggtg
attgccgggatggaagcgaccggcgtgctggttgaccgcgaggagctggcgcggctgtcg
aagacatttgccgaggaaatggagaagctggaagcagagatccacgaactggccggcgaa
agcttttccatcggcagccccaagcagctcggcgaaatcctgttcggaaagcttggcctg
aagggcggcaagaagggcaagtcgggccaatattcgaccgatgttaccgtgctcgagcgg
ctggccggtgacggtgagccgatagcgcagaaggtggtcgactggcggcagctggcgaag
ctcaaatccacctataccgatgcgctgcaggagcagatcaatccgggaaccgggcgggtc
cacacctcctatagcctgagcggcgcgcagaccgggcggctgtcctcgaccgaacccaat
ctgcagaatatcccgatccggaccgagatcggccggcagatacggcaggcctttgtcgct
gcgcccggcaatgtcattcttgccgccgactatagccagatcgagctccggctggcggca
catatcgccgatgtcgagacattgaaggaagcgttcgccaatggcgaggacatccataac
cgcaccgcgcgcgaactgttcggtgccgaagaccgcgacgcccgggcgcgtgccaagacg
atcaactttgccatcctctacggcatttcgcgctggggtctggccaagcggctggaggtc
gatgcggatgaagcgcaggcgatgatcgacacctatttcgagcgttttccgggcatcaac
cagtatatttcccggacgctgcaatcggtgcgcgaggccggctataccgagacgctgttc
ggtcgcaagacatggttcgagcggatcaagtcgcccaatcaggcggagcggcagggcagc
gaacgcgccgcgatcaacgccccgatccagggaacgagcgccgatatcatcaagcgcgcg
atggcacgcatgctgcccgcgctggccgaggcggggctgcacgatgtccggatgctgatg
caggtgcacgatgaactggtgttcgaattgcccgaagctgatgtggaggccgccagcgcg
gtgatccggtcggtgatgtcgggcgcggcggaaccggcggtgaaactatcggtgccgctc
gacgtcgatatcggcaccggcaagagctgggacgaggcgcactag
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