Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02173
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Entry
SPHFLASMR4Y_02173 CDS
T04949
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfla03016
]
SPHFLASMR4Y_02173 (rnz)
Enzymes [BR:
sfla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SPHFLASMR4Y_02173 (rnz)
Transfer RNA biogenesis [BR:
sfla03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SPHFLASMR4Y_02173 (rnz)
Prokaryotic type
SPHFLASMR4Y_02173 (rnz)
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ASK88917
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All DBs
Position
complement(2220899..2221972)
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AA seq
357 aa
AA seq
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MMKLGLALVMLTLFGMGAALLFQEPIGKRLFAGAAESAVTRDVIGDLPDGMHVALCGSGS
PLPDPTRAGPCSAVIIDGRMFIVDIGGGAVRNLGLMGLNPGATEALLLTHFHSDHIDGMG
ELMLQRWAGGGHDTPLPVIAPDGVDAIVDGLNAAYAADVRYRIAHHGEATMPAAGAGGAA
MPFSFPEGQEQMVVYERDGIRITAFSVAHKPIAPAVGYRFDYKGRSVVFSGDTVKLPAIA
QACNGCDLLVHEVLNAEMVGTLATAFEKAGRKRLVKIMADIPDYHTTPVEAAETAQAGKA
KMLVFSHIVPALPIGYLDAYFMKGAAAAYDGPLILGEDGMLFSLPANKDSIERDDLL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgggtctggcgctggtgatgctgaccctgttcgggatgggagcggcgttg
ctgtttcaggagccgatcggcaagcggctgttcgccggtgccgctgaaagcgcggtgacg
cgcgatgttatcggcgacctgcccgacggcatgcatgtggcgctctgcggttccggttcg
ccactgcccgacccgacgcgggccgggccctgctcggcggtcatcatcgacggcaggatg
ttcatcgtcgatatcggtggcggcgcggtgcgcaatctcggcctgatggggcttaatccg
ggcgcgaccgaagccctgttgctgacccatttccacagcgatcatatcgacggcatgggc
gaattgatgctgcagcgctgggccggtggcggccatgacacgcccttgccggtgatcgcg
ccggacggagtagacgcgatcgtcgacggcctgaacgccgcctatgcggccgatgtgcga
tatcgtattgcccatcatggcgaagcgacgatgccggcggccggggccggcggcgcggca
atgcccttctctttccccgaagggcaggagcagatggttgtttacgagagggacggcatc
aggatcacggccttttccgtggcgcacaaaccgattgcgcctgccgtcggctatcggttc
gattacaagggccgctcggtggtcttcagcggtgatacggtgaaactgcctgcgattgcc
caggcttgcaatggctgcgacctgctggttcacgaagtgctgaacgccgaaatggtcggt
acgctggcaacagctttcgaaaaagccgggcgcaagcggctggtcaagatcatggcggat
atcccggactatcacaccacgccggtcgaggcggcggagacggcgcaggcgggcaaagcg
aagatgctggtcttctcgcacatcgtgccggcactgccgatcggctatctcgacgcctat
ttcatgaagggcgccgcggctgcctatgatggtccgctcatattgggggaggacgggatg
ctgttcagccttcccgccaataaggatagtatcgaacgggacgatcttctctaa
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