Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02198
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Entry
SPHFLASMR4Y_02198 CDS
T04949
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00020
Citrate cycle (TCA cycle)
sfla00190
Oxidative phosphorylation
sfla00650
Butanoate metabolism
sfla00720
Other carbon fixation pathways
sfla01100
Metabolic pathways
sfla01110
Biosynthesis of secondary metabolites
sfla01120
Microbial metabolism in diverse environments
sfla01200
Carbon metabolism
Module
sfla_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sfla_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfla_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SPHFLASMR4Y_02198 (sdhB)
00650 Butanoate metabolism
SPHFLASMR4Y_02198 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
SPHFLASMR4Y_02198 (sdhB)
00720 Other carbon fixation pathways
SPHFLASMR4Y_02198 (sdhB)
Enzymes [BR:
sfla01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SPHFLASMR4Y_02198 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
RickCE_cat
Fer4_9
Fer4_7
Motif
Other DBs
NCBI-ProteinID:
ASK88942
UniProt:
A0A220W834
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All DBs
Position
complement(2247217..2247999)
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AA seq
260 aa
AA seq
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MATFTLPKNSKIRKTGELHQALTNGKKRPFKVYRYDPDKGENPRYDTFEIDTDDCGPMVL
DALIKMKSEQDATLTFRRSCREGICGSCAMNINGKNGLACTTAIEDCGSKVTITPLPHME
VIKDLVPDFTHFYAQYASIQPWLKTVTPTPSGKERLQSPEDRSKLDGLYECILCACCQTS
CPSYWWNSDKFLGPAILLQAYRWLADSRDEMTGERLDELEDPFRLYRCHTIMNCANACPK
GLSPAKAIAEIKKMTASREV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggctactttcacgctccccaagaatagcaagatccgcaagacgggcgaattgcaccag
gcgttgaccaacggcaaaaagcgacctttcaaagtctatcgctatgatcccgacaagggc
gaaaatccgcgttatgacacgtttgagatcgacaccgatgattgcggaccgatggtgctc
gatgcgctgatcaagatgaagtcggagcaggacgccacgctgaccttccgccggtcctgc
cgcgaaggcatctgcggttcctgcgcgatgaacatcaatggcaaaaatggtctggcctgc
actacagcgatcgaagattgcgggagcaaggttaccatcacgccactgccgcatatggaa
gtcatcaaggatctggttccggatttcacccatttctacgcgcaatatgcgtcgatccag
ccgtggctgaaaacggtcacgccgacgccatcgggcaaggaacgcctgcagtcgccggaa
gatcgcagcaaactggacggcctgtacgagtgtatattatgcgcctgctgccaaaccagt
tgcccgagctactggtggaacagcgacaaattcctcggacctgcgattctgttgcaggcc
tatcgctggctcgccgacagccgcgacgaaatgaccggcgaacggctcgacgaactggaa
gatccattccggctctatcgctgtcacacgatcatgaactgcgccaatgcctgtcccaag
ggcctgtcgccagccaaggctattgccgaaatcaagaagatgaccgcttcgcgcgaagtc
tga
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