Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02345
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Entry
SPHFLASMR4Y_02345 CDS
T04949
Symbol
ccl
Name
(GenBank) (R)-citramalyl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00280
Valine, leucine and isoleucine degradation
sfla00650
Butanoate metabolism
sfla00907
Pinene, camphor and geraniol degradation
sfla01100
Metabolic pathways
sfla01120
Microbial metabolism in diverse environments
sfla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SPHFLASMR4Y_02345 (ccl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SPHFLASMR4Y_02345 (ccl)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SPHFLASMR4Y_02345 (ccl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPHFLASMR4Y_02345 (ccl)
Enzymes [BR:
sfla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
SPHFLASMR4Y_02345 (ccl)
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GFIT
Motif
Pfam:
HMGL-like
UBD
Motif
Other DBs
NCBI-ProteinID:
ASK89088
UniProt:
A0A220W8G1
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Position
complement(2392097..2393017)
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AA seq
306 aa
AA seq
DB search
MSKDNRKTISILEVGPRDGLQNESEIISTADKLGLITRMLDAGVKRMEVASFVHPGRVPQ
MADAEDVIAGLPDHDDISYIGLCLNKRGVLRGLATREGNKRGIDEAGCVVVASNTFGEKN
QGQTIEQGIRENREMIRFAKAEGLKAQVTISAAFGCPFEGAVKPETVLRIAEEIAAEDPM
EIALADTIGVGVPAQVTDLFGRLKELLPDHIKMRAHFHDTRNTGIANAWAAVEAGVETLD
SSLGGLGGCPFAPNATGNIATEDLVNLLDRSGVGHDLDLRKAIATNQWFETVLGRPLPSL
VARAES
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacaatcgcaagacgatttctattcttgaagtcggcccgcgtgacgggctg
cagaacgaatccgaaatcatttcgacagcggacaagctgggcctgataacacgcatgctg
gacgctggcgtcaagcgcatggaggtggcaagctttgtccatccgggccgggtaccgcag
atggccgatgcggaagacgtgatcgccggcctgccggaccacgacgatatatcctatatc
ggattatgcctgaacaagcgcggcgtgctgcggggcctggcgacgcgcgaaggcaacaag
cgcgggattgacgaagccggctgcgtggtcgtggcgagcaacacatttggcgagaagaat
cagggccagaccatcgagcagggaatcagggagaatcgcgagatgatccgatttgccaag
gccgagggactgaaagcgcaggtcactatctcggctgccttcggctgtcccttcgaaggc
gcggtaaaaccggagacggttctgcgaatcgccgaagaaatcgccgccgaagatccgatg
gaaattgcgctggccgatacgatcggtgtcggcgtgcctgcgcaggtcaccgatctgttc
ggccggctcaaggagctgttgcccgaccatattaagatgcgggcccatttccacgacacg
cgcaacaccggcatcgccaatgcgtgggccgcggtagaggccggcgtagagacgctcgat
tccagcctcggcgggctagggggctgtccgttcgcgcccaatgccaccggcaatatcgcg
accgaagatctggtgaatctgctcgaccgctccggcgtcggccacgatctcgatctgcgc
aaggccatagccacaaatcaatggtttgaaactgttctcggccggccgcttccgtctctg
gtcgcgagagccgaatcctga
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