Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02403
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Entry
SPHFLASMR4Y_02403 CDS
T04949
Symbol
pheS
Name
(GenBank) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPHFLASMR4Y_02403 (pheS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfla01007
]
SPHFLASMR4Y_02403 (pheS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfla03016
]
SPHFLASMR4Y_02403 (pheS)
Enzymes [BR:
sfla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
SPHFLASMR4Y_02403 (pheS)
Amino acid related enzymes [BR:
sfla01007
]
Aminoacyl-tRNA synthetase
Class II (U)
SPHFLASMR4Y_02403 (pheS)
Transfer RNA biogenesis [BR:
sfla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPHFLASMR4Y_02403 (pheS)
Prokaryotic type
SPHFLASMR4Y_02403 (pheS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
Motif
Other DBs
NCBI-ProteinID:
ASK89145
LinkDB
All DBs
Position
complement(2455429..2456544)
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AA seq
371 aa
AA seq
DB search
MSDIEAVRDKYLEQIGAAADGDALEAIRVAALGKKGEISLLLKTLGKMSPEERQEQGPKI
NGARQAVADALAARKEGMEAAALDAKLATETLDLTLPPPAAPKGSIHPVSQVMDELAEIF
ADLGFSVATGPEIEDDWHNFTALNIPDTHPARAMHDTFYFPQTDENGMPKLLRTHTSPVQ
IRTMMDVAKQTDGAGEPIYIIAPGRTYRSDSDATHTPMFHQVEGLVIDKGIHMGHLKWTL
ETFVRAFFERDDIELRLRPSYFPFTEPSAEVDVGFSVEGGRRIIGGDPRGDNGGWMEILG
SGMVHPNVIRNCGLDPDVWQGFAFGCGIDRLAMLKYGMDDLRAFFDGDLRWADHYGFDAL
DVPTLSGGVGA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgaagcggtcagagacaaatatctggagcagattggcgcggcagccgat
ggcgacgcactggaagccatccgcgtggccgcgctcggcaagaagggcgagatttcgcta
ctactgaaaaccctgggcaagatgtcgccggaagagcgtcaggaacagggcccgaagatc
aacggcgcgcggcaagctgttgccgatgcgctggctgcccgcaaggaaggaatggaagcc
gccgcgctggacgcgaagcttgccaccgagacactcgacctgacactgcccccgccagcc
gccccgaaaggcagcatccatcctgtctcgcaggtcatggacgaactggccgaaatcttc
gccgacctcggcttctcggtcgccaccggtccggaaatcgaggacgactggcataatttc
accgcgctcaacattccagacacccatccggcgcgggcgatgcacgacactttctatttc
ccgcagactgacgaaaacggcatgccgaaactgctgcgcacccatacctcgccggtacag
atccggacgatgatggacgtcgcgaaacagaccgacggggccggcgagccgatttacatc
atcgctcccggccgcacctatcgcagcgacagcgatgccacccacacaccgatgttccat
caggtcgagggtctggtgatcgacaagggcatccatatgggccacctgaaatggaccttg
gaaacattcgtccgcgcctttttcgaacgcgacgatatcgaattgcgcctgcgcccaagc
tatttcccgttcaccgaacccagcgcggaagtcgatgtcggcttctcggtcgaagggggc
cggcgcataatcggcggcgacccgcgtggcgacaatggcggctggatggagattctcggt
agcggcatggtccatcccaatgtcatacgcaattgcggtctcgatcccgatgtctggcaa
ggctttgccttcggctgcggcatcgaccggctggcaatgctgaaatatggcatggacgat
cttcgcgctttcttcgacggcgacctgcgctgggccgatcattatggctttgacgcgctc
gacgtccccaccttgagcggaggagtgggcgcatga
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