KEGG   Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02414
Entry
SPHFLASMR4Y_02414 CDS       T04949                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sfla  Sphingorhabdus sp. SMR4y
Pathway
sfla00740  Riboflavin metabolism
sfla01100  Metabolic pathways
sfla01110  Biosynthesis of secondary metabolites
sfla01240  Biosynthesis of cofactors
sfla02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sfla00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SPHFLASMR4Y_02414 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SPHFLASMR4Y_02414 (ribD)
Enzymes [BR:sfla01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SPHFLASMR4Y_02414 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SPHFLASMR4Y_02414 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD Fcf1
Other DBs
NCBI-ProteinID: ASK89156
UniProt: A0A220W8N2
LinkDB
Position
2464901..2465881
AA seq 326 aa
MLTPPGDAHFMAVALALSERGRGRTGANPNVGCVIVKKGVVIGRGWTQPGGRPHAEEMAL
AEAGAAAKGADIYVTMEPCAHESTRGPTCSIAIIAARPKRVIVATLDADERTRRRGIDRL
GDAGIPVSVGIREPEACRAMAGFLCRVENGRPFVTLKLAMSLDGCIAMADGSSQWITGER
ARAHAHLERARNDAILVGAGTSRVDRPRLDVRLDGLADRSPQPIVLGSDKDLPEHWLQLD
EPAAIAGLADINWLLVEGGAQTAASFLAAGLVDRLMLYRAPIIIGGGLPSIADIGLEKLG
EAHGQWRRTDRRDLGQDMLEIYDRAA
NT seq 981 nt   +upstreamnt  +downstreamnt
atgctgaccccgcccggcgacgcccatttcatggctgtcgcgcttgccctgtcggagcgg
ggccgcggccggaccggtgccaatcccaatgtcggctgcgtcattgttaaaaagggcgtc
gtcatcggccgtggctggacccagccgggcggccggccgcatgccgaggaaatggcgctc
gccgaagccggagccgccgcgaaaggcgcggatatctatgtcaccatggaaccctgtgcc
catgaaagcacacgcggcccgacctgcagcattgcaatcatcgcagccagaccgaaacgg
gtgatcgtcgccactctcgatgccgacgaacggaccaggcggcgcggtattgaccggctg
ggcgatgccggcattccggtttcggtcggcatccgggagcccgaagcctgccgcgcgatg
gccggttttctgtgccgggtcgaaaatggccgcccgtttgtcacgctcaaactcgcgatg
tcgctcgacggctgcatcgccatggccgacggttcgagccagtggatcaccggcgaacgg
gcgcgggcccatgcccatctggagcgggcgcgcaacgatgccattctggtcggtgcaggc
acctccagggtcgatcgcccccggcttgatgtccggctcgatggtcttgccgaccgttcg
ccccaaccgattgttctcggcagcgacaaggatttgccggaacattggctgcagctggac
gaaccggccgcgattgccggtcttgccgatatcaactggctgctggtcgaaggcggcgca
cagaccgccgcctcgttcctggcagcgggacttgtcgaccggcttatgctctatcgggcc
ccgatcatcattggcggcggcctgccttccattgccgatatcggactggaaaagctgggt
gaggcgcatggccagtggcgacgcaccgaccggcgcgatctgggacaggatatgcttgag
atatatgatcgcgccgcctag

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