Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02764
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Entry
SPHFLASMR4Y_02764 CDS
T04949
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00300
Lysine biosynthesis
sfla00470
D-Amino acid metabolism
sfla01100
Metabolic pathways
sfla01110
Biosynthesis of secondary metabolites
sfla01120
Microbial metabolism in diverse environments
sfla01230
Biosynthesis of amino acids
Module
sfla_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SPHFLASMR4Y_02764 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SPHFLASMR4Y_02764 (lysA)
Enzymes [BR:
sfla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SPHFLASMR4Y_02764 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASK89500
UniProt:
A0A220W9I0
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Position
2837405..2838664
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AA seq
419 aa
AA seq
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MDHFQLKNGIIHAEDIPLSKIAEDVGTPVYVYSRATLERHATVFREGLKDAGKIHLAFAV
KANPNLAVLRILANQGYGADVVSGGEMQRALAAGMKAEDIVFSGVGKSREELTLGLEKGI
GQFNLESEEEGVMLAEIAASRGEKASATLRVNPDVDAGTHAKISTGKKENKFGVGIDVAP
DIYARLSGLDGLNLRGVAVHIGSQLQSLDPLEKCYARMGELVTQLRSAGHAITHVDLGGG
LGVPYKPEDNPPSPAEYGAMVARVTRDWNVTLMFEPGRVIAGNSGVMITRVIRIKPGVDS
DFVIVDAAMNDLMRPAIYDAWHDFAAVEPSGEMMVASIVGPICESSDIFAKERTVDRVET
DDLGIFRTAGAYGATMANTYNSRPLVPEVLVDGDRYAVVAERIDPATIMAAENVPDWLK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttggaccatttccagctcaaaaatgggattatacacgcggaagatatcccgttgtcgaaa
attgctgaagacgtcggcaccccggtctatgtctattcgcgcgcgacactcgagcgtcat
gcgacagtgtttcgggaggggctgaaagacgcgggcaaaatccatctggctttcgcggtg
aaggcgaaccccaatctcgcggtcctgcgaatcctggccaatcagggctatggtgcggac
gtagtatcgggtggtgagatgcagcgcgcattggcagccggcatgaaggcggaagatatt
gtcttctccggtgtcggcaaaagtcgtgaggagctcacgctgggcctggaaaagggcatt
ggccagttcaatctcgaatcggaagaagaaggtgtgatgctggcggaaatcgctgcgtcc
cgcggtgagaaagcctcggcaaccctgcgtgtgaaccccgatgtggatgctggcacccat
gcgaaaatttcgaccggcaagaaagagaataaattcggggtcggaattgatgtggcgccg
gatatttatgcgcggctgtccggactggacggtctgaatttgcgtggcgttgccgtgcac
atcggtagccagttacagagccttgacccgctagaaaaatgctatgcaagaatgggcgaa
ctggtcacccaattgcgcagtgccggtcatgccatcactcatgtcgatctgggcggtggc
ctgggcgtgccttacaagcccgaagacaatccgcccagcccggcggaatatggtgccatg
gttgcacgcgtcacccgggactggaatgttaccctgatgtttgaaccgggccgcgtgatc
gccggtaatagcggtgtcatgatcaccagggttatccggatcaaaccgggtgtggacagc
gattttgtcatcgtcgatgcagctatgaatgatctgatgcggccagcaatctatgatgcg
tggcatgattttgcagcggttgagcccagcggtgaaatgatggttgcgtcgatcgtgggg
cccatttgtgaaagcagcgacatttttgccaaagagcggactgttgatcgcgttgaaacc
gatgatctcgggatattccggacggctggtgcctatggcgcgaccatggcaaatacctat
aatagtcgcccgctggtaccggaagtgctggttgatggcgatcgctatgccgtggtcgcc
gagcggatcgatccggcgacgatcatggccgcggagaatgtgcccgactggctgaaataa
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