Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02792
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Entry
SPHFLASMR4Y_02792 CDS
T04949
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
sfla
Sphingorhabdus sp. SMR4y
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ASK89527
UniProt:
A0A220W9K7
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Position
2860782..2862173
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AA seq
463 aa
AA seq
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MKFADIGLSEELLKSVAEAGYDEPTPIQAQAIPSVLMMKDIIGIAQTGTGKTASFVLPMI
DILAHGRSRARMPRSLILEPTRELAAQVAENFEKYGKNHNLSMALLIGGVSMGDQIKALE
KGVDVLIATPGRLMDLFDRGRILMSGCELLVIDEADRMLDMGFIPDIESICSKLPATRQT
MLFSATMPPPIKRLSDQFLSNPKYIEVSRPATANTSIDQSLIEVAPKAKRKLLVDILDNE
GVETAIIFCNRKTEVRDLCQSLRKDGFDAGQIHGDMDQSSRLAELDRFKSGEINILCASD
VAARGLDIKGVSHVINYDIPWHPDDYIHRIGRTGRAGATGVAITFITRSDAEHVESIEKL
TGMKIAVRKERKAATGSKPAEKTVGEPEQAKPAKAKGPRRDGAAKNARQDDRPKKPRQDE
GRKKPERSVKVQEEKPPVVQDSSDIDDGWNGPMPSFLEARLNR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgccgatatcggcctgtctgaagaactgctgaaatccgtagccgaagctggc
tatgacgaaccgacgccaattcaggcgcaagccatcccctccgtcctgatgatgaaagat
atcatcggcattgcccagaccggcaccggcaaaaccgcgagtttcgtgctgcctatgatc
gacatactggcgcatggccgctcgcgagcgcggatgccacggtcgctgatcctcgagccg
acccgcgaactggccgctcaggtcgccgagaatttcgagaaatatggcaagaaccataat
ctcagcatggctctgctgatcggcggtgtgtcgatgggcgaccagatcaaggcgctggaa
aaaggcgtcgatgttctgattgcgactccgggacgtctgatggatctgttcgatcgcgga
cggatcttgatgtcgggctgcgaattgctggtgatcgacgaagcggaccggatgctcgac
atgggcttcattcccgatatcgaatccatctgctcaaaactgccggcaacccgccagacg
atgctgttttcggcgaccatgccgccaccgatcaagcggctgtccgaccagtttctgagc
aatccgaaatatattgaagtgtcgcgtccggccacggccaacacttcgattgatcagtca
ttgattgaggtcgcgcccaaggccaagcgcaagctgctcgtcgacattctcgacaatgaa
ggcgtcgagaccgctatcatattctgcaatcgcaagaccgaagtgcgggatttgtgccag
agcctgcgcaaggatggttttgacgccgggcagattcacggcgacatggaccagagctcg
cgtctcgccgagctggaccggttcaagtccggtgaaatcaacatattgtgtgcgtccgac
gttgccgcccgggggctggatatcaagggtgtgagccatgttatcaactatgatatcccc
tggcatccggatgactatattcaccggattggccgcaccggccgcgctggtgctaccggt
gttgcgatcactttcatcacccgcagcgatgccgagcatgtcgagagtatcgaaaagctg
accggcatgaaaatcgcggtccgcaaggaacgcaaggccgcgacgggcagcaagccagcc
gagaaaaccgttggcgagcccgagcaggcaaagcctgctaaggcgaaagggccacggcgt
gacggggctgcgaaaaatgcgcggcaggacgatcggccgaaaaagccacggcaggacgaa
ggccggaaaaagccggaacgatccgtcaaggtccaggaggaaaaaccgcctgtggttcag
gacagcagtgacattgatgacggctggaatggcccgatgccgagctttctggaagccagg
ctcaaccgctaa
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