Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02830
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Entry
SPHFLASMR4Y_02830 CDS
T04949
Name
(GenBank) outer membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfla02000
]
SPHFLASMR4Y_02830
Transporters [BR:
sfla02000
]
Other transporters
Pores ion channels [TC:
1
]
SPHFLASMR4Y_02830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
Surface_Ag_2
Opacity
Motif
Other DBs
NCBI-ProteinID:
ASK89565
UniProt:
A0A220W9R9
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All DBs
Position
2900707..2901831
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AA seq
374 aa
AA seq
DB search
MRKLALGMALASTALATPALARDGQWYVGVEGGAMIVEDVDLDIAGITDTASIDHDTGYD
FDGIVGYDFGSFRLEAEVGYKQASSGDLIGTTPVLGGAFIPGLGNSGNAGYFIDTNGDVN
ALSFMLNGLVDFGPDDGLQGFVGGGVGVARTELTNIIATPWLDDSDTGFAWQAIAGVRAP
LSDSWDVGLKYRYFNTTGVDLVDSLGRDVSTDVSSHSILGSLIYNFGGEPAAPPPPPPPP
PPPPPPPPPPPPPPPPAVCAPGPYIVFFDWDQSDITPEAASVLDNAVTAYGDCGSAQVML
AGHADKSGSASYNVGLSQRRNAAVRAYLESRGIGSGVISSEAFGESRPRVETADGVREPQ
NRRVEVMYGPGSGN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcttgccttaggaatggcgcttgcctccacagcgctcgctacacctgccctg
gcccgtgatggccagtggtatgtcggtgtcgagggcggtgcgatgattgtcgaagacgtt
gacctggatatcgctggtatcacagatactgccagcatcgatcacgacacaggatatgat
ttcgacggaatagtcggttatgatttcggatcattccgtcttgaagctgaagttggctac
aaacaggctagctctggtgaccttatcggtacgaccccggttctcggcggcgcgttcatt
cctggtctcggaaattccggaaacgccggatatttcattgacacaaacggcgacgtcaat
gcgctcagcttcatgctgaacggtctggttgacttcggtcctgatgacggacttcagggc
tttgtaggcggcggcgttggtgttgctcgtacagaactcaccaacattattgcaacgcca
tggcttgacgattccgataccggtttcgcatggcaggcaattgccggtgtccgcgctccg
ctcagcgacagctgggacgttggcctgaaatatcgctatttcaacacaaccggtgttgat
cttgtcgattcgctcggtcgtgatgtttcaaccgatgtttcgagccactcgatcctcggt
agcttgatctacaactttggcggcgaacctgcggcaccaccgccaccaccgcctccgcca
ccaccgccaccaccgccacctccaccgccaccaccgccaccaccaccggcagtatgtgcg
cctggcccttacattgtgttctttgactgggatcagtcggatatcactcctgaagcggct
tcggttctcgacaatgcggttaccgcatatggtgattgtggttcggctcaggtcatgctg
gctggtcacgctgacaaatctggttctgccagctacaacgtcggcctgtcccagcgtcgc
aacgcggctgttcgtgcgtatcttgaatcgcgcggcatcggcagcggcgttatctcgagc
gaagccttcggtgaatcgcgtcctcgcgttgaaaccgcagacggcgttcgtgagcctcag
aaccgtcgtgttgaagttatgtacggacctggttccggcaactaa
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