Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_02951
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Entry
SPHFLASMR4Y_02951 CDS
T04949
Symbol
cnrH
Name
(GenBank) RNA polymerase sigma factor CnrH
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfla03021
]
SPHFLASMR4Y_02951 (cnrH)
Transcription machinery [BR:
sfla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPHFLASMR4Y_02951 (cnrH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
DUF5039
PhyR_sigma-like
Sigma70_ECF
DUF134
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ASK89684
UniProt:
A0A220WA57
LinkDB
All DBs
Position
3014557..3015135
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AA seq
192 aa
AA seq
DB search
MRKTQSDAQVPENALIAEAAKGSKAAFNRVMNEQAPRLQNIALRMMGNSSDAEDAVQEAL
AAAWFKLASFDLSRPISPWLTRITVNKCRDLLRKRRIRQFFELHSDNEASMMVADDAPDP
CAELQAHQALEVMQKEITRLPAALREPFVLVTFGENSQAEAAHILGISEKAVETRIYRAR
NRLREIADKLEG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaaaacgcagtccgacgcgcaagttccggaaaatgcgctcatcgcagaggctgca
aaaggtagcaaagctgcattcaaccgcgtgatgaacgagcaagcgccccggctgcaaaat
atcgcgctcagaatgatgggcaacagttctgatgccgaagatgcggttcaagaggcactg
gcagcggcctggttcaagctcgccagttttgatctgtcgcggcccatttctccttggctc
actcgtatcacggtcaacaaatgccgcgatcttttgcgtaaacgccggatcaggcagttt
tttgaacttcacagcgataatgaagctagcatgatggtcgctgacgatgcacccgaccca
tgtgcagaattgcaggcgcatcaggcgcttgaagtcatgcaaaaagagattactcgcttg
ccagcggcattgcgtgagccattcgtgttggtcacttttggcgagaatagccaagccgaa
gcagcgcatattctcggaatatcagagaaagccgtcgaaacgcggatttaccgtgcccgc
aatcgcctgcgagaaattgccgacaaacttgaggggtga
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