Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03013
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Entry
SPHFLASMR4Y_03013 CDS
T04949
Symbol
yfdE
Name
(GenBank) acetyl-CoA:oxalate CoA-transferase
KO
K01796
alpha-methylacyl-CoA racemase [EC:
5.1.99.4
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00984
Steroid degradation
sfla01100
Metabolic pathways
sfla01120
Microbial metabolism in diverse environments
sfla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
SPHFLASMR4Y_03013 (yfdE)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SPHFLASMR4Y_03013 (yfdE)
Enzymes [BR:
sfla01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.99 Acting on other compounds
5.1.99.4 alpha-methylacyl-CoA racemase
SPHFLASMR4Y_03013 (yfdE)
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Motif
Pfam:
CoA_transf_3
Motif
Other DBs
NCBI-ProteinID:
ASK89746
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Position
complement(3078654..3079694)
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AA seq
346 aa
AA seq
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MAGPLTGINIIEFAGIGPGPFCGMMLADQGATVTVLHRPGAAPDPRLALSRSRNLVEIDL
KSEEGIRTARELVKNADGLIEGFRPGVMERLGLGPDILLADNPKLVYGRMTGWGQYGPLA
SAAGHDINYISISGALHAFGRAGEKPTPPINMVGDFGGGGMMLAFGMVSALLHAKTGGTG
QVVDCAMTDGSAALMAMIFDFHNIGQWQDERGVNLLDTGAHFYDSYETSDGKFISIGSIE
PQFYAELRQVAGLTDDADFDAQMNPRQWPVLKEKLTALFKTRTRDQWCALMEGTDICFAP
VLSLAEAKEHPHNVERQTFVDVGGLQQPAPAPRYSVTVLDPPKRPA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaccacttacgggtatcaacatcatcgaatttgcaggaatcggccccggcccc
ttctgcggcatgatgctggccgaccagggcgcgaccgtcaccgttctgcaccgtccgggg
gccgccccggatccgcgccttgccctttcccggtcccgcaatctggtcgagatcgacctg
aaatccgaagaaggcatcaggacggcccgcgagctggtgaaaaatgccgatggtctgatc
gaaggcttccgcccgggcgtgatggagcggcttggtctgggacccgacatcctgctcgcc
gacaatcccaagcttgtttacggccggatgaccggctggggccaatatggaccgctcgcc
tccgcagcgggccatgatatcaactatatttccatttccggcgccctgcatgctttcggg
cgggccggcgaaaagccgacgccgccgatcaatatggtgggcgatttcggcggcggcggc
atgatgctggcgttcggtatggtttccgccctgctgcacgcgaaaacaggcggcaccggt
caggttgtggactgcgcgatgaccgatggctcggccgcattgatggcaatgattttcgat
tttcacaatatcggccagtggcaggacgaacggggtgtcaatttgctcgataccggcgcg
catttctatgacagctacgagacgtccgatggcaaatttatctcgatcgggtcgatcgag
ccgcaattttacgcagagcttcggcaagtcgccggcctgaccgacgatgccgatttcgac
gcccagatgaatccccggcaatggccggtgctgaaggaaaagctgaccgcgctgttcaag
accaggacccgcgaccaatggtgcgcgctgatggagggaacggatatatgctttgcccct
gtcctgtcgctggcggaggccaaggaacatccccataatgtcgaaaggcagacattcgta
gacgtcggcggattgcaacagccggcaccggcgccgcgttactcggtgaccgttctggat
ccgcccaaacgcccggcctga
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