Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03062
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Entry
SPHFLASMR4Y_03062 CDS
T04949
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00250
Alanine, aspartate and glutamate metabolism
sfla00310
Lysine degradation
sfla00350
Tyrosine metabolism
sfla00650
Butanoate metabolism
sfla00760
Nicotinate and nicotinamide metabolism
sfla01100
Metabolic pathways
sfla01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SPHFLASMR4Y_03062 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SPHFLASMR4Y_03062 (gabD)
00310 Lysine degradation
SPHFLASMR4Y_03062 (gabD)
00350 Tyrosine metabolism
SPHFLASMR4Y_03062 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SPHFLASMR4Y_03062 (gabD)
Enzymes [BR:
sfla01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SPHFLASMR4Y_03062 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SPHFLASMR4Y_03062 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SPHFLASMR4Y_03062 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ASK89795
UniProt:
A0A220WAE1
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Position
complement(3121247..3122680)
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AA seq
477 aa
AA seq
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MSNAYPSKLQLHIDGEWIDGADRDVHQVVDPATGEAIADLPKATTADLDRALNAADRAFP
LWRDTPVAERAVILHKAAELMRERAPEIGRLMTFEQGKPLAQAVGEVTASASHFDIMAEE
AKRCYGRVLVRPAGQNSFVKYQPVGPVAAFSPWNFPVFTPVRKLAPAIAAGCSIILKPAE
ETPASPIEMVRCLIDAGLPSGVAQVVFGDPAEVSSHLIASDVIRKVSFTGSVPVGKHLMK
LAAEGMKRTTMELGGHAPVLVFDDCDLDKTLDLVVTGKFRNAGQVCVSPTRFYVQSGIYD
RFEKVFTERAQKVSVGDGFGAVEMGPLANPRRPSAVGAMIADARTRGADVRLGGERRGEK
GFFFDPTVLSHVPLDADIMNDEPFGPVAVMRPFGTLDEAIEQANRLPLGLAAYAFTENLR
TANLVGDRIEAGMVAINNLTVSPGDAPFGGVKESGHGSEDGPDGLKAYMVTKAIHQA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcttatcccagcaaattgcaacttcatatcgacggcgaatggatcgacggc
gcggaccgcgacgttcatcaggtcgtagatccggcgaccggcgaggccattgccgatttg
cccaaggcgacgacagccgatctcgaccgcgccctgaacgctgccgaccgtgcatttccg
ctctggcgcgacacgccggtggccgagcgcgccgtgattttgcacaaagctgcagagctg
atgcgcgagcgggcgccggaaatcggtcgcctgatgactttcgagcagggcaagccgctg
gcccaggcggtcggtgaagtcaccgcctccgccagccatttcgatatcatggccgaagaa
gcgaagcgttgctacggacgcgtgctggtccgcccggcgggccagaacagtttcgtcaaa
tatcagccggtcggtccggtcgccgccttcagcccctggaatttcccggttttcaccccc
gtgcgcaaactggctcctgccattgccgcgggctgctcgatcattctcaaaccggcggaa
gaaaccccggccagcccgatcgagatggtccgctgtctgatcgacgcgggtctgccgtcg
ggcgtcgcgcaggtcgtctttggcgatccggccgaagtgtccagccatctcatcgcctcg
gatgtgatccgcaaggtcagtttcaccggttcggtcccggtcggcaagcatctgatgaaa
ctcgccgccgagggcatgaagcgtaccaccatggaactgggcggtcacgcgccggtgctg
gtcttcgacgattgcgatctggacaagacgctcgatctggtggtcaccggaaaattccgc
aacgccggtcaggtctgcgtctcgccaacccgcttctatgtccagtcgggcatttatgac
cggttcgagaaagtcttcaccgaacgcgcccagaaggtcagcgtcggcgacggctttggc
gcggtcgaaatgggtccgctcgccaacccgcgccggccaagcgccgtgggcgcgatgatc
gcggacgcgcgaaccaggggcgcggatgtccggctcggcggcgaacggcgcggcgaaaag
ggctttttctttgatcccaccgtgctctcccacgtcccgctcgacgccgatatcatgaac
gacgagccgttcggcccggtcgccgtgatgcgccccttcggcacgctcgacgaagccatc
gaacaggccaaccgcctgccgctgggtttggcggcctacgccttcaccgaaaatctgcgc
actgccaatctggtcggtgaccggatcgaggcgggcatggtcgcgatcaacaatctgacc
gtcagcccgggcgacgcgcccttcggcggggtcaaggaaagcggtcacggatcggaagac
gggcccgacgggctgaaagcctatatggtcaccaaagccatccatcaggcatag
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