Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03156
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Entry
SPHFLASMR4Y_03156 CDS
T04949
Symbol
ileS
Name
(GenBank) isoleucine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SPHFLASMR4Y_03156 (ileS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfla01007
]
SPHFLASMR4Y_03156 (ileS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfla03016
]
SPHFLASMR4Y_03156 (ileS)
Enzymes [BR:
sfla01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SPHFLASMR4Y_03156 (ileS)
Amino acid related enzymes [BR:
sfla01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SPHFLASMR4Y_03156 (ileS)
Transfer RNA biogenesis [BR:
sfla03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SPHFLASMR4Y_03156 (ileS)
Prokaryotic type
SPHFLASMR4Y_03156 (ileS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
DUF507
tRNA-synt_1b
DUF6555
EXS
Motif
Other DBs
NCBI-ProteinID:
ASK89886
LinkDB
All DBs
Position
complement(3222461..3225181)
Genome browser
AA seq
906 aa
AA seq
DB search
MTLDKNFDPATIEARWYAHWENKGLFRPDRDDREPFTIVNPPPNVTGSLHIGHALDNTLQ
DIIIRHERLKGKDALWVVGMDHAGIATQMVVERQMNERQQKRTDFTREEFVAKVWEWKEE
SGGTITRQLRRLGCSMDWSNERFTMDEGMNEAVLKVFVDLYNDGLIYRDKRLVNWDPALK
TAISDLEVETVDTKGSFWHFKYPLADGVTLDNGQNYIEVATTRPETMLADMAVAVHPSDE
RYKSVIGKEIEQPITGRRFKIVADEHADPELGSGAVKITPGHDFNDFEVGKRAGFVAGEM
LNMLDREANVCQTADGLVPEEYIGLHRFRKDGINGARELVVQQMKEQGYLIPHLSKTKDG
EEVEQDAEPRTIATPFGDRGGVVIEPWLTDQWYVDAETLAQPAINAVRDGDIEIVPKSWE
KTYFNWMENIQPWCVSRQLWWGHQIPAWFDENGKIYVAMDEASAQAQAGADVTLTRDPDV
LDTWFSSALWPFGTLGWPEQTKDLERHYPNDLLISGFDILFFWDARMAMQGIQFMKEVPW
KRLYLHGLVRAEDGSKMSKSKGNVVDPLGLIDQYGADALRFFMAAMESQGRDIKMDDKRV
EGYRNFATKLWNASRFCEANGIGASNTLAAPAANLPVNRWIISEVVETQQALDKALTDLR
FDAAANSIYHFTWDRFCDWYLELIKPLLQGEDASAAEETRIVAGWVLDQIIVMLHPFMPF
ITEELWHAMGDRKYDLIVAKWPAPKATIDADAKSEVDWLIKLISEVRSTKVELNIAPGTK
MTAHVRDGDDDLEAKIARQYAALDRVGRLESVSFDPAPDGPSAQIVVEGATYVLPLAGAI
DIEAEKARLNKALEAAQKEAKSLGGRLGNPNFVEKAKPEAVEKARTDLAEKEAESERLQA
AINRLG
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaccttagacaaaaattttgaccccgccaccatcgaagcgcgctggtatgcccattgg
gaaaacaagggcctgttccggcctgaccgcgacgatcgcgaaccgttcacgatcgtcaat
ccgccgcccaacgtcaccggcagtctgcatatcggccatgcgctggataacactttgcag
gatatcatcatccggcacgagcggctgaagggcaaggacgcgctctgggtcgtcgggatg
gatcacgccggtatcgccacccagatggtggtcgagcgccagatgaacgagcggcagcag
aagcgcaccgatttcactcgcgaggaatttgtcgcgaaagtctgggagtggaaagaggaa
agcggcggcacgattaccaggcagttgcgccggctgggttgttcgatggactggtcgaac
gagcgcttcaccatggacgagggcatgaacgaggcggtgctcaaggtttttgtcgatctc
tacaatgatggcctgatctatcgcgacaagcggttggtcaactgggatcccgcgctcaaa
accgcgatctccgatctggaagtcgaaactgtcgataccaaaggcagtttctggcatttc
aaatatccgctcgctgacggcgtaacactggataacgggcagaattatatcgaggtggcg
acgacacggccggaaacgatgctggcagatatggccgtcgccgtgcacccgagtgatgaa
cgctacaagagcgtgatcggcaaggaaatcgagcagccgattaccggccgccgcttcaag
attgttgccgacgaacatgcggacccggagctcggttccggcgcggtgaaaattacccct
ggccatgatttcaacgatttcgaggtcggaaaacgcgcgggttttgtagccggcgaaatg
ctcaacatgctcgatagggaggccaatgtctgtcagacagcggacgggctcgtaccggag
gaatatattgggctccaccggttcaggaaagacggcatcaacggcgcccgcgaactggtg
gtgcagcagatgaaggaacagggctacctgatcccgcacctgtcgaaaaccaaggacggc
gaggaggtcgaacaggacgccgagccgcgcaccattgcaacgccattcggcgatcgcggc
ggcgtggtcatcgagccatggctgaccgaccaatggtatgtcgatgccgaaaccctcgcc
caaccggcgatcaatgcggtgcgcgacggcgatatagagatcgtgcccaaaagctgggaa
aagacctatttcaactggatggaaaatatccaaccgtggtgcgtctcgcggcaactatgg
tgggggcaccagatccccgcatggtttgacgagaatggcaagatttacgttgccatggat
gaagcatctgcgcaggcacaagctggcgcagatgtcacgcttacccgcgaccccgatgtg
ctcgacacctggttctcctccgcactctggccctttggtacgctcggctggccggaacag
acgaaggatctcgaacgccactatcccaatgacctgctgatctccggctttgatatcctg
ttcttctgggacgcgcggatggcgatgcagggcatccagttcatgaaggaagtgccgtgg
aagcggctctatctgcacgggctggtgcgcgccgaggatggctccaaaatgtccaaatcg
aagggcaatgtggtcgacccgctggggctgatcgaccaatatggcgccgatgcgctgcgc
ttcttcatggcggcgatggaaagccagggccgcgacatcaagatggatgacaagcgggtc
gaaggctatcgcaatttcgccaccaagctgtggaatgcttcccgcttctgtgaagccaat
ggcattggtgccagcaatacgctcgctgcccctgcagccaacctgcccgtcaaccgctgg
atcatttccgaagtcgtcgagacgcagcaagcgctcgacaaggccttgaccgatttgcgt
tttgatgcggcagcgaactccatctatcatttcacttgggaccgcttctgtgactggtat
ctcgagctgatcaagccgctattgcagggcgaggacgccagcgcggccgaggaaacccgc
attgtggctggctgggtgctcgaccagatcatcgtcatgctgcatccattcatgccgttc
attacggaagaattgtggcatgcgatgggcgaccggaaatatgatctgatcgtggcaaaa
tggcctgcaccgaaagctaccattgatgcggacgcaaagtcagaagtcgattggctgata
aagctgatttccgaagtgcgttctaccaaggtcgaactcaatatcgcccccgggaccaag
atgaccgcccatgtccgcgatggagacgacgatctggaagccaagattgcgcgccaatat
gccgcgcttgaccgggtcggacgcctcgagagcgtttccttcgatccggcaccggacggg
ccttcggcgcagatcgttgtagagggcgcgacctatgtcctaccactggcgggtgcgatc
gacatcgaggcggaaaaagcccggctcaacaaagctttggaagccgctcagaaagaagcg
aaatcgcttggtggtcgcctcggcaatcccaattttgtcgagaaagccaaaccggaagcg
gtcgagaaggcccgtaccgatctggccgagaaagaagcagaatccgaacggctgcaagcg
gctatcaatcgtctgggatga
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