Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03294
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Entry
SPHFLASMR4Y_03294 CDS
T04949
Symbol
ftsH3
Name
(GenBank) ATP-dependent zinc metalloprotease FtsH 3
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SPHFLASMR4Y_03294 (ftsH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfla03019
]
SPHFLASMR4Y_03294 (ftsH3)
03009 Ribosome biogenesis [BR:
sfla03009
]
SPHFLASMR4Y_03294 (ftsH3)
04131 Membrane trafficking [BR:
sfla04131
]
SPHFLASMR4Y_03294 (ftsH3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfla04147
]
SPHFLASMR4Y_03294 (ftsH3)
Messenger RNA biogenesis [BR:
sfla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SPHFLASMR4Y_03294 (ftsH3)
Ribosome biogenesis [BR:
sfla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SPHFLASMR4Y_03294 (ftsH3)
Membrane trafficking [BR:
sfla04131
]
SNARE
SNARE associated proteins
Others
SPHFLASMR4Y_03294 (ftsH3)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SPHFLASMR4Y_03294 (ftsH3)
Exosome [BR:
sfla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SPHFLASMR4Y_03294 (ftsH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_33
CDC48_2
AAA_2
AAA_14
TIP49
IstB_IS21
AAA_28
nSTAND3
RNA_helicase
AAA_7
NPHP3_N
AAA_18
Zeta_toxin
Mg_chelatase
Sigma54_activat
ABC_tran
DUF815
AAA_30
AAA_3
AAA_11
AAA_24
AAA_17
TsaE
AAA_lid_PRS2_C
Parvo_NS1
AAA_25
ATPase
Viral_helicase1
NB-ARC
SLFN-g3_helicase
PhoH
Motif
Other DBs
NCBI-ProteinID:
ASK90020
UniProt:
A0A220WAY5
LinkDB
All DBs
Position
3354347..3356674
Genome browser
AA seq
775 aa
AA seq
DB search
MSDPASINDKTEDDNMRLKLQVANARPEDSGRGLARLSRDNLGKLGLIEGDVVEIVGKQA
TPARAVLPYPEDEGLDFVRLDGLQRANAGVGAGDFVEIRKIESKAAKKVVFGPAQKDLRL
QGNGGGLKRSFMGRPLKAGDFVATHGQQQVDRGDMPPQLRQMLAAPAFSLTQIRLNVIAT
TPKGIVHIDEDTEVELRPEYEESTEHRRADVTYDDIGGLHETIDQLREMVELPLRYPQLF
TRLGVDPPRGVLLHGPPGTGKTRLARAVANESDAEFFLINGPEIMGSAYGESEKKLREIF
EAATKAAPSILFIDEIDSIAPKRGQVQGETEKRLVAQLLTLMDGLESRLNLVVIAATNRP
EAIDEALRRPGRFDREIIVGVPDVAGRREILGIHTRGMPLEKSVDLKELARTTYGFVGAD
LAALTREAAIEAVRRIMPKLDLESESVPPEVLEELVVQRHDFVEALKRVQPSAMREVMVQ
APDVRWEDIGGLDEAQMRLKEGIELPMKNPEAFIRLGIRPAKGFLLYGPPGTGKTLLAKA
VAREAEANFIATKSSDLLSKWYGESEQQIARLFARARQVAPTILFIDEIDSLVPARGGGM
GEPQVTERVVNTILAEMDGLEEMQSVILIGATNRPGLVDPALLRPGRFDELVYVPVPGKA
GRRRILAIHTAKMPLGKDVDLDDIAERTDRYSGADLEDLVRRAGLYALREFGGLVETVQM
KHFEKALEDSRASVTVEMEEEYSKMEAQLKQNAMRAEPIGFVSPGMLTPIKDSKH
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgatccagcgtcaatcaacgacaagaccgaagatgataatatgcggctgaagctg
caggttgccaatgcccggcccgaagacagcggtcgcgggctggcccgtctgtctcgtgat
aatctcggaaagctcgggctgatcgagggcgacgtcgtggaaattgtcggtaaacaggca
acgccggcgcgggcggtcctgccctatccggaagacgaggggctggatttcgtccgcctt
gacggtctgcagcgcgccaatgccggcgtcggtgcgggagattttgtcgaaattcgcaag
atcgaatcgaaggcggccaagaaagttgttttcggtccggcacagaaagacctccggttg
cagggcaatggtggcggtctgaagcgcagcttcatgggacgtccgctgaaggccggtgat
tttgtcgccacccatggccagcaacaggtcgaccgcggggatatgccgccgcaattgcgg
cagatgctggcagcaccggctttttccctgacccagatacggctcaacgtcatcgcgacc
acgcccaagggcattgtccatatcgacgaggataccgaggtcgaactgcggccggagtat
gaggaatcgaccgagcatcgtcgcgccgatgtaacctatgatgatattggcggcttgcac
gaaaccatcgatcaactgcgcgagatggtcgaattgccgttgcgctatccgcaattgttt
acccggctcggcgttgatccgccacgtggcgttttgctgcacggtcctccggggacaggc
aagacccgactggctcgcgccgtcgccaatgaaagcgacgcggagtttttcctgatcaac
ggtccggaaatcatgggctctgcttatggcgagtcggaaaagaaactgcgtgagatattc
gaagcggcgaccaaggccgcgccttcgatcctgtttatcgacgagatcgactcgattgcg
ccaaagcgcgggcaggttcagggcgagaccgaaaagcggctggtggcgcaattgctgacg
ctgatggacgggctggaatcccggctcaatctggtcgtgattgcggcaaccaatcgcccc
gaagcgatcgacgaggcattgcgccgtccgggtcgttttgaccgggaaatcatcgtcggt
gtgcccgatgtagctggccggcgggagatattgggcatccacacgcgcggcatgccgctg
gaaaagtcggtggacctgaaagaactggcccgcacgacttatggcttcgtcggcgccgat
cttgccgcgctgactcgcgaagcggctatcgaagcggtccgccggatcatgcccaagctg
gatctggaatcggaaagcgtgccgccggaagtgctcgaagagctggtggtgcagcggcat
gattttgtcgaagccctgaagcgggtccagccgtcagcgatgcgcgaagtcatggtccag
gcacccgatgtccgctgggaagatatcggtggtctcgacgaggcgcagatgcggctcaaa
gagggtatcgaactgccgatgaaaaatccggaagccttcatccggctgggcattcgtccg
gccaagggttttctgctctacgggccaccgggaaccggcaagaccttgctggccaaggcg
gtcgcgcgcgaagcggaggcgaatttcattgccaccaaatcgagcgacctgctgtccaaa
tggtatggcgagagcgagcagcagatcgcgcggctttttgcccgggcgcggcaggtggcg
ccgacaatcctgtttatcgacgagattgacagtctggtgccggcgcgcggtggcggcatg
ggcgagccccaggtgaccgagcgggtcgtcaacacgatccttgcggaaatggacggactg
gaagaaatgcagtcggtcattctgatcggcgcaaccaaccgtcccggtctggtcgatccg
gcattgctgcgacccggccgttttgacgagctggtctatgtcccggtgccgggcaaggcc
gggcgccgccggatattggctatccacacggcaaaaatgccgctcggcaaggatgtcgac
ctcgacgatatagcagaacgcaccgaccgctattcgggcgccgatctggaagatctggtt
cgccgggcggggctttatgccttgcgtgaatttggcggactcgtcgaaaccgtccagatg
aagcatttcgagaaagctctggaagacagccgggcttcggtcaccgtggaaatggaggaa
gaatattccaagatggaagcgcagctgaagcagaacgcgatgcgggccgaaccgatcggt
ttcgtgtcgccgggtatgctgacgccgatcaaggacagcaagcactag
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