Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03310
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Entry
SPHFLASMR4Y_03310 CDS
T04949
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
sfla
Sphingorhabdus sp. SMR4y
Pathway
sfla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SPHFLASMR4Y_03310 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfla03400
]
SPHFLASMR4Y_03310 (uvrB)
DNA repair and recombination proteins [BR:
sfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPHFLASMR4Y_03310 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SPHFLASMR4Y_03310 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
UB2H
SWI2_SNF2
AAA_16
AAA_22
TrwB_AAD_bind
AAA
Microtub_bd
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ASK90036
LinkDB
All DBs
Position
3370472..3372649
Genome browser
AA seq
725 aa
AA seq
DB search
MTELVIRRGLAEPETGDDFVPHKPSRPAKSEGGKRFKLVSDFEPAGDQPEAIRELVEGMR
AEERDQVLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEFKNFFPDNAVEYF
VSYYDYYQPEAYVARSDTYIEKESSVNEAIDRMRHSATRSLLERDDVIIVASVSCLYGIG
SVETYSAMIFDLHKEQSVDQRDIIRKLVALQYKRNDMAFARGSFRVRGDNLEIFPSHYED
MAWRISFFGDEIEEIVEFDPLTGKKGASLNKVRVYANSHHVTPGPTMKQAMEAIKFELAE
RLKELEAEGKLIEHQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PDNALLFVDESHQTVPQIGAMSKGDHRRKINLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
VSVSATPGPWEMEQSGGVFSEQVIRPTGLIDPPVEIRPVEDQVDDVINECRKVAEQGYRT
LITTLTKRMAEDLTEFMHEAGIKVRYMHSDVETLERIELIRDLRLGVYDVLIGINLLREG
LDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRMTGSMERAISETD
RRREKQVAYNLEHGITPASIKKNIGDIVAHATAKDMVTGAADEESKPLVGHNLRTHIESL
EKQMRDAAADLEFEEAGRLRDEIRKLEAEELGLPADLQVAQPKGRSTEGRPGTRKMGYGK
VQRKI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacagaattggtgatcagaagaggcctggcggaacccgaaaccggcgatgatttcgtt
ccgcacaagcccagtcgtccggccaaatcggaaggcggaaagcggttcaagctggtcagc
gattttgaaccggccggcgaccagccggaagcgatcagggagctggtggaaggaatgcgc
gcagaagagcgcgatcaggtgctgctcggggtgacgggatcgggcaagaccttcactatg
gcgaaagtcattgaagagctgcagcggcccgcgctgatcctggcgccaaacaagatattg
gcggcgcagctttacggcgagttcaagaatttctttcccgacaatgctgttgaatatttt
gtttcttattatgattattaccaacccgaagcctatgtcgctcggtcggatacctatatc
gaaaaggaaagctcggtaaacgaggcgatcgaccggatgcggcacagcgcgacccggtct
ttgctcgaacgcgatgacgtcatcatcgtcgcctcggtctcctgtctctacggtatcggg
tcggtcgaaacctattcggcgatgatcttcgatctgcacaaggaacagtcggtcgaccag
cgggacatcatccgcaagctggtggcgttgcagtacaagcgcaacgacatggccttcgcc
cgcggcagctttcgggtgcggggggacaatctcgagatattcccgtcgcattacgaggat
atggcttggcgaatcagctttttcggcgacgagatcgaggaaattgtcgaatttgacccg
ctgaccggcaagaagggcgccagcctgaacaaggtacgggtctacgccaattcgcaccat
gtcactccggggccgacgatgaagcaggctatggaagcgataaaattcgagcttgccgaa
aggctgaaggagctggaagcggaaggcaagctgatcgagcatcagcggctggagcagagg
accaattttgatctcgagatgatcgccgccactggcagttgcgcgggcattgaaaattac
tcgcgctttctgaccggacgcctgccgggcgaaccgccgccgacattgttcgaatatctg
ccggacaatgcgctgctgtttgtcgatgaaagccaccagacggtgccgcaaatcggtgcc
atgtcgaagggcgatcaccgccgcaagatcaatctggcggaatatggcttccgcttgccc
agttgtatcgacaaccgcccgctgcgtttcaacgaatgggacgcgatgcggccgcagacg
gtcagcgtctcggcgacacccggtccctgggaaatggagcagagcggcggcgtgttcagc
gaacaggtcatccgtcccaccgggctgatcgatccgccggtcgagatccggccggtcgag
gatcaggtcgacgatgtgatcaacgaatgccgcaaggtggcggagcagggctatcgcact
ttgatcaccacgttgaccaagcggatggcggaagatctgaccgaattcatgcacgaagcc
ggaatcaaggtccgctacatgcacagcgatgtcgagaccctggaacggatcgaactaatc
cgggatctcaggctgggtgtctatgacgtgttgatcggcatcaacctgctgcgcgaagga
ctggatattcccgaatgcgggctggtggcgatactcgacgccgacaaggaaggcttcctg
cgcagcgaaacgtcgctgatccagaccattggccgcgccgcgcgcaatgtcgatggccgg
gtcattctctatgccgaccggatgaccggatcgatggagcgcgcgatcagcgagaccgac
cggcgccgcgaaaagcaggttgcctataatctcgaacacggcatcaccccggcatcgatc
aagaagaatatcggcgatatcgtcgcccatgccacggccaaggatatggtgaccggcgcg
gccgacgaggagagcaagccgctggtcggtcacaatctgcggacccatatcgaaagcctc
gagaaacagatgcgcgacgcggcggccgatctggaattcgaggaagccggccgcctgcgc
gacgaaatccgcaagctggaagcggaagagctgggactgcccgcggacctgcaagtcgcg
caacccaagggccgctccaccgaaggtcgcccgggcacgcgcaagatgggctatggcaag
gtgcagcggaagatttaa
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