Sphingorhabdus sp. SMR4y: SPHFLASMR4Y_03368
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Entry
SPHFLASMR4Y_03368 CDS
T04949
Symbol
cirA
Name
(GenBank) colicin I receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sfla
Sphingorhabdus sp. SMR4y
Brite
KEGG Orthology (KO) [BR:
sfla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfla02000
]
SPHFLASMR4Y_03368 (cirA)
Transporters [BR:
sfla02000
]
Other transporters
Pores ion channels [TC:
1
]
SPHFLASMR4Y_03368 (cirA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ASK90094
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All DBs
Position
3432859..3435822
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AA seq
987 aa
AA seq
DB search
MTKFTKLKATVAPMVLGIAMVSVPAFAQEAGAADEQPGELIVVTGSRIASATVESAAPLQ
VVSAESIDDAGVTNVQELLLENPVFGTPGLSRTNSAFLTSGTGVATVDLRDLGSDRTLVL
INGRRVVASVAGSATVDLNVIPTQFVERVDILTGGASSLYGSDAVAGVVNFVYKSNFEGI
EANAQYGITEQGDDAKYQLNVTAGTNFADGDGNIMVHFGYSNEEGLLSKQRSNTQIDALD
SIYFGGDYGTDTEPFFSSFPPQGRFITPAGTFTYAPNGQLQDCFTTNGPTCNASIGPGIG
PNGFNRQQFRTLAVPVQRYLFAAAGEYALSDDINFFFEGTFNKTSSSRIIEPFPLESGGS
NGIFPTDGGYNVENYLPGTNTIVANPFVPTEILNAAADSNGDGLRDIGFVRRLAEFGPRS
GRTERDFYRFVVGFDGGLFDDRFRWDVSYNYGQVNENQTSSGQVNVVNFRDALAVMTDVN
DLNGNGLTTDAICIDAEARANGCVPANIFGAGNISQGAVDYIQAQGTYQTGLKQQVLQGN
LSGTLLDLPAGPLGIAVGVEYRKESSFSDNDALTNQGLNAGNVLPDTSGSFDVKEAFAEI
KVPILADTPGFQLLEVGGAIRVSDYSTVGSVVSYNGTATWQPIDDLRIRGTYARAVRAPN
IGELFAGLSQTFPSGLIDPCEGIGATGGGATGDNCRADAGVAANIAANGTFTLNQADIQG
ISGFNGGNPDLFEETADSWTVGAVLSPRSIPALGNLTITADYYNIEITDVISGFPRQFSL
QQCYDEGNSTFCDLIVRRQAGTAVNSVGSIDLINALQVNAAVLKTSGVDVTASWSTPLGL
TAGDRLSLRGAYTHVIKNDFFSLPTADADPSAGEIGTAKDRFTANATYSTDDFKVGFTGT
FIGKSYEDDQFDGPKAYSVPAYFLLDMNTSFYVTEKFEFYFGVDNLLDKDAPNILTGTPF
NVTGSDTAADVYDVFGRRYYTGVRLRF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttacgaagctaaaggcgaccgtagcaccaatggtgctgggaatcgctatg
gtatctgtacctgccttcgcgcaggaagcaggcgctgctgatgaacaacccggcgaactc
attgttgttaccggttcgcgcatcgcgtcggcaaccgtcgaatctgctgctccgctgcag
gttgtctcggctgaatcgattgacgatgccggtgttaccaacgttcaggagcttctgctt
gagaatcctgttttcggtacgccaggcctcagccgtaccaactccgcgttcctgacttca
ggtaccggcgttgcaacggtcgatcttcgtgacctcggttccgaccgtacgctggttctg
atcaacggccgtcgtgttgttgcatcggttgctggttccgcaactgtcgatctcaacgtc
atcccgactcagttcgttgagcgtgtcgacattctgaccggtggcgcttcctcgctctat
ggttcggacgctgtcgcaggtgttgtcaacttcgtatacaagtcgaacttcgaaggtatc
gaagccaacgcacaatatggcatcaccgagcagggcgatgacgcgaagtaccagttgaac
gtaaccgctggcacgaacttcgccgatggcgacggcaacattatggtccacttcggttat
tcgaatgaagaaggcctgctttccaagcagcgttctaacactcagatcgacgctctggac
tccatctacttcggtggtgattatggtacggacaccgagccgttcttctccagcttcccg
ccacagggccgcttcattaccccggctggaaccttcacctatgctccaaacggtcagctg
caggattgcttcaccaccaatggacctacctgtaatgcaagcatcggaccaggcattggc
cccaacggcttcaaccgccagcagttccgtacacttgccgttcctgttcagcgttatctt
ttcgctgcagccggtgaatatgcgctgagcgatgatatcaacttcttcttcgaaggtacg
ttcaacaagacgtcttcgtcgcgtatcatcgaaccgttcccgctggagtccggtggttcc
aacggcattttcccgaccgacggtggatataatgtcgaaaactatctgccaggcaccaac
accattgtagccaacccgtttgttccgaccgaaattctgaacgcggcagcggatagcaat
ggcgacggtctgcgtgacatcggctttgtccgtcgtctggcagaatttggtcctcgctcc
ggtcggacagaacgcgatttctatcgcttcgtagtcggcttcgacggcggtctgttcgat
gaccgttttcgctgggacgtaagctataactacggtcaggtgaacgaaaaccagacttct
tcgggtcaggttaatgttgtcaacttccgtgacgcgcttgcggtcatgacggatgtcaac
gatctgaatggcaacggtctgacgaccgatgcgatttgtatcgatgctgaagctcgtgca
aatggttgtgttcctgcaaatatcttcggcgccggtaacatttcgcaaggcgcggttgat
tacatccaggcacagggcacctatcagactggcctgaaacagcaggttcttcagggtaac
ctttccggtacgctgcttgacctgcctgctggtccgcttggcattgctgttggcgttgaa
tatcggaaagaatcgtctttctccgataacgatgctctgacaaaccagggtctgaatgcc
ggtaacgttctgccggacaccagcggttcgttcgacgtcaaagaagcctttgctgaaatc
aaggttccgatcttggctgatacgccaggcttccagcttctcgaagttggtggtgctatc
cgtgtttccgattactccacggttggttcggttgtgagctacaacggtacggctacatgg
cagccaattgatgatctccggatccgcggtacctatgctcgtgctgttcgcgctccgaac
atcggtgaattgtttgcgggtctttcgcagacgttcccatcgggtctgatcgatccttgc
gaaggcattggtgcaactggcggcggtgcaaccggcgacaattgccgggctgatgctggc
gttgcagccaacatcgcagcaaacggtacgttcacgcttaaccaggctgacattcagggt
atctcgggcttcaacggcggcaaccccgacctgttcgaagaaaccgctgactcctggacc
gttggtgcggttctgtcaccacgttcgatccctgcactgggtaacctgacgattactgcc
gactactacaacatcgaaatcaccgacgtaatttcgggcttcccacggcagttctcgctt
cagcagtgctatgatgaaggtaactcaaccttctgtgatctgatcgttcgtcgtcaggca
ggcacagcggttaacagcgtgggttcgatcgatctgatcaacgccctgcaggttaacgct
gctgttctgaaaacgtcgggtgttgacgttaccgcgtcctggagcacgccacttggtctg
accgctggcgatcgtctctctcttcgcggtgcctacacgcacgtgatcaagaacgacttc
ttctccttgccaactgcagatgctgatccatcggcaggtgaaatcggtacggccaaagat
cgcttcaccgcgaacgcgacctactcgaccgatgacttcaaggttggatttaccggtacc
ttcatcggcaagtcctacgaagatgaccagttcgacggacccaaagcttactcggtacca
gcctatttcttgctggacatgaacacctcgttctacgtcaccgagaagttcgagttctac
tttggtgttgataacctgctcgacaaagatgcaccgaacattctgaccggtacgccgttc
aacgtgaccggttccgataccgctgctgatgtctatgacgtcttcggtcgacgttattac
accggtgttcgtctgcgcttctaa
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