Streptomyces flavusporus: ACKTSN_15355
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Entry
ACKTSN_15355 CDS
T11144
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sflu Streptomyces flavusporus
Pathway
sflu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sflu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACKTSN_15355 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sflu03021
]
ACKTSN_15355 (rho)
03019 Messenger RNA biogenesis [BR:
sflu03019
]
ACKTSN_15355 (rho)
Transcription machinery [BR:
sflu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACKTSN_15355 (rho)
Messenger RNA biogenesis [BR:
sflu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACKTSN_15355 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XLX06990
LinkDB
All DBs
Position
complement(3267474..3269498)
Genome browser
AA seq
674 aa
AA seq
DB search
MSDTTDLMGARVEETAAAPATDASAPATGAGSRRRRGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGGAPAKGAEAAETKPKRRATSKARTGEDAPAEKTAKAAKRAE
APAEKAVAQQQIEIPGQPAGGPSHDGGTSRASAAERGGEAERGGDDAPAERRRRRATAEA
GSPETVTAEAKSEPKAEAPAQQQPQGDAGEGAEGRRRDRRERGRDRDRDRRKGDDQQRGQ
QQGQQQGQQGGGRQDRQQDDDDFEGGRRGRRGRYRDRRGRRGREEMGSEPQIAEDDVLIP
VAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHITGAVRQPKEGERREKF
NALVRLDSVNGMAPEHGRGRPEFNKLTPLYPQDRLRLETDPGVLTTRIIDLVSPIGKGQR
GLIVAPPKTGKTMIMQAIANAITHNNPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFD
RPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSTA
LYPPKRFFGAARNIEDGGSLTILATALVDTGSRMDEVIFEEFKGTGNAELKLDRKLADKR
IFPAVDVDASGTRKEEILLGAEELGIVWKLRRVLHALDQQQAVELLLDKMKQTKSNAEFL
MQIQKTTPTPGNGD
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcacgtgtcgaggagaccgctgccgcgcccgcc
acggacgcctccgcgcctgccaccggtgccggctcccggcggcgccgcggtaccggcctc
gagggcatggtgctggccgagctgcagcaggtcgcatccggcctcggcatcaggggcacc
gcgcgtatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggccggaggcgga
gccccggcgaagggcgccgaggccgccgagaccaagcccaagcgccgcgccacctccaag
gcgcgcacgggtgaggacgcgcccgccgagaagaccgcgaaggccgcgaagagggccgag
gcgcccgccgagaaggccgtggcccagcagcagatcgagatccccggccagccggctggg
ggcccctcccacgatgggggcacctcccgcgcgagcgcagccgagcgtgggggagaagcc
gagcgtgggggagacgacgcccccgcggagcgccgtcgtcgccgggccaccgccgaggcc
ggcagccccgagaccgtcaccgccgaggcgaagagcgagccgaaggccgaggcgcccgcg
cagcagcagccgcagggcgacgccggtgagggcgccgagggccgccgccgggaccgccgt
gagcgcggccgggaccgcgaccgtgaccgccgtaagggcgacgatcagcagcgcggtcag
cagcagggccagcagcagggccagcagggtggcggccgccaggaccgtcagcaggacgac
gacgacttcgagggcggccgccggggccgtcgcggccgctaccgcgaccgccggggccgt
cgtggccgcgaggagatgggcagcgagccgcagatcgccgaggacgacgtcctgatcccg
gtcgcgggcattctggacatcctcgacaactacgccttcatccgtacgtcgggctacctg
ccggggccgaacgacgtgtacgtctccctcgctcaggtccgcaagaacggcctgcgcaag
ggcgaccacatcaccggcgcggtccgccagcccaaggaaggcgagcggcgcgagaagttc
aacgcgctggtccgcctggactccgtcaacggcatggcgcccgaacacggccgtggccgc
ccggagttcaacaagctgacgccgctgtacccccaggaccggctccgtctggagacggac
cccggcgtgctcaccacccgcatcatcgacctcgtctcgcccatcggtaagggccagcgc
ggtctgatcgtggccccgccgaagaccggcaagaccatgatcatgcaggcgatcgccaac
gcgatcacgcacaacaaccccgagtgccacctgatggtcgtcctcgtcgacgagcgtccg
gaagaggtcaccgacatgcagcggtcggtcaagggcgaggtcatctcctcgaccttcgac
cgcccggccgaggaccacaccacggtcgccgagctcgccatcgagcgcgccaagcgactg
gtggagctgggccacgacgtcgtcgtcctgctcgactcgatcacgcgtctgggccgtgcg
tacaacctcgcggcgcccgcctccggccgcatcctgtccggtggtgtcgactcgaccgcc
ctgtacccgccgaagcgcttcttcggtgcggcccgcaacatcgaggacggcggctcgctg
accatcctcgccaccgccctggtggacaccgggtcccgcatggacgaggtgatcttcgag
gagttcaagggcaccggcaacgcggagctcaagctcgaccggaagctcgccgacaagcgc
atcttcccggcggtggacgtcgacgcgtccggcacccgtaaggaagagatcctgctcggc
gccgaggagctgggcatcgtctggaagctgcgccgggtgctgcacgcgctcgaccagcag
caggcggtcgagctgctcctcgacaagatgaagcagacgaagtcgaacgccgagttcctg
atgcagatccagaagacgacgccgacgccgggcaacggcgactga
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integrated database retrieval system
