Streptomyces flavusporus: ACKTSN_16105
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Entry
ACKTSN_16105 CDS
T11144
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sflu Streptomyces flavusporus
Brite
KEGG Orthology (KO) [BR:
sflu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sflu03021
]
ACKTSN_16105
Transcription machinery [BR:
sflu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACKTSN_16105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
PF0610-like_N
DUF7343
Sigma70_ECF
MarR_2
NirdL-like_HTH
MarR
HTH_24
HTH_3
IF2_N
HTH_Crp_2
GerE
HTH_AraC
HTH_ParB
Motif
Other DBs
NCBI-ProteinID:
XLX12812
LinkDB
All DBs
Position
3418981..3420123
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AA seq
380 aa
AA seq
DB search
MRDEERSTRELPAEDSGPGGSRRMDGIDGIPEQARPHPEDDSDATAEAGFPDEGQRAQEG
AVQSAPLERRIGVPPAHGGPPTRGRARVGEEARARGRATGGTMSEHERYSEHDAPATQDA
QATQATQHDPQDRSGARAMFVELRRLKEGSPEYAELRNQLVRMHLPLVEHLARRFRNRGE
PLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQEL
RLSLTTATAELSQLHGRSPTVHELAEKLSISEEEVLEGLESANAYSTLSLDVPDTDDESP
AVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMH
VSRLLARTLAQLREKLLVEE
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggacgaagagcgcagcacacgggagctgccggccgaggacagcggtccgggcggt
tcccgacgcatggacggcatcgacggcatccctgagcaggcccggccgcacccggaggac
gactccgacgccacggcggaggccggcttcccggacgaggggcagcgggctcaggaaggt
gccgtgcagagcgcgcctctggaacggcggatcggggtgccccctgcccatgggggtccc
cccactcgagggagggcgagagtgggggaggaggcgagggctcggggaagggcgacgggc
gggacgatgagcgagcacgagcgatactccgagcatgatgcgccggccacacaggacgcg
caggccactcaggccacgcagcacgaccctcaggaccgcagcggggcgcgcgccatgttc
gtcgagctgcgcaggctgaaggagggcagcccggagtacgcggaactgcgcaaccagctg
gtccgtatgcacctgccgctcgtcgagcacctcgcgcgccgcttccgcaaccggggcgag
ccgctggacgacctcacccaggtcgccaccatcggcctgatcaagtcggtcgaccgcttc
gacccggatcgcggtgtcgagttctccacgtatgcgaccccgacggtcgtcggcgagatc
aagcggcacttccgcgacaagggctgggccgtgcgcgtcccgcgccggctgcaggagctg
cgactgtcgctgaccaccgcgacggccgagctctcgcagctgcacggccgctcccccacg
gtccacgagctcgccgagaagctgtccatctcggaggaggaggtcctggagggcctggag
tccgccaacgcgtactccacgctgtccctggacgtccccgacacggacgacgagtctccg
gccgtcgccgacacgctcggcgcggaggacgaggcgctggagggcgtcgagtaccgggag
tcgctcaagccgctgctggaggaccttccgccccgcgagaagcggatcctgctgctccgc
ttcttcggcaacatgacccagtcgcagatcgcgcaggaggtcggcatctcgcagatgcac
gtgtcgcggctgctggcgcggacgctggcgcagctgcgggagaagctgctcgtggaggag
tag
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