Streptomyces flavusporus: ACKTSN_20185
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Entry
ACKTSN_20185 CDS
T11144
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sflu Streptomyces flavusporus
Pathway
sflu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sflu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACKTSN_20185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sflu03400
]
ACKTSN_20185
Enzymes [BR:
sflu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACKTSN_20185
DNA repair and recombination proteins [BR:
sflu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACKTSN_20185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XLX07861
LinkDB
All DBs
Position
complement(4254834..4255499)
Genome browser
AA seq
221 aa
AA seq
DB search
MTPRTTAPEDAYTAEPFVPDEAGDLDALRRAAADCRGCPLHRDATQTVFGTGNDHARVML
VGEQPGDQEDRQGKPFVGPAGRLLDRALAEAGIDPGDAYVTNAVKHFKFTQAEPRKRRIH
KTPTLREMTACGPWLAAELAVVEPELIVLLGATAGKALLGSSFRVGEVRGALLEREIHGR
PEKLVATVHPSSVLRAQDDKDRKAAYEGLVADLKVAARALS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgacccctcgtacgaccgcacccgaagacgcgtacaccgccgagcccttcgtccccgac
gaggccggcgatctggacgccctgcgccgggccgccgccgactgccggggctgcccgctg
cacagggacgccacgcagaccgtgttcggcaccgggaacgaccacgcgcgcgtgatgctc
gtcggcgagcagcccggggaccaggaggaccggcagggcaaaccgttcgtggggccggcc
gggcggctgctggaccgggcgctggccgaggcgggcatcgaccccggcgatgcctatgtc
accaacgccgtcaagcacttcaagttcacccaggccgagccgcgcaagcgccgtatccac
aagacgccgaccctccgggagatgaccgcgtgcggcccctggctggccgccgagctggcc
gtcgtggagcccgagctgatcgtgctcctgggcgcgaccgcggggaaggcgctgctgggc
tcgtcgttccgggtcggggaggtaagaggggcgctgctggagcgcgagatccacggccgg
ccggagaagctggtggcgacggtgcatccgtcgtcggtgttgcgggcacaggacgacaag
gatcggaaggccgcgtacgaggggctggttgccgatctgaaagtggcggcgcgagcgttg
tcgtaa
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