Streptomyces flavusporus: ACKTSN_21115
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Entry
ACKTSN_21115 CDS
T11144
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sflu Streptomyces flavusporus
Brite
KEGG Orthology (KO) [BR:
sflu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sflu03032
]
ACKTSN_21115 (topA)
03400 DNA repair and recombination proteins [BR:
sflu03400
]
ACKTSN_21115 (topA)
Enzymes [BR:
sflu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACKTSN_21115 (topA)
DNA replication proteins [BR:
sflu03032
]
Prokaryotic type
DNA Topoisomerases
ACKTSN_21115 (topA)
DNA repair and recombination proteins [BR:
sflu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACKTSN_21115 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XLX08024
LinkDB
All DBs
Position
complement(4454984..4457821)
Genome browser
AA seq
945 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPIYVVNADKKAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKDAIREAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDSSDPSSLVARLQTVD
GRRVAQGRDFDSLGQLKSANTLHLDEANARALAAALEDTRFSVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQIAQKLYENGYITYMRTDSTTLSDTAIAAARAQVTQLYGA
DYLPPQPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
VEGDPLSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGEGT
GAGGAADAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNDIVLRVGRYGPYIERGEKD
SEGHQRADIPSDLAPDELTVELAEELLAKPSGDFELGTDPETGHTIVAKDGRYGPYVTEV
LPEGTPKTGKNAVKPRTASLFKSMSLDTVTLEDALKLMSLPRVVGTDADGVEITAQNGRY
GPYLKKGTDSRSLQSEGQLFTITLEEAQAIYAQPKQRGRAAAKPPLKELGEDPVSGKPVV
VKDGRFGPYVTDGETNATLRSGDSVETITPERGFELLAEKRAKGPAKKTAKKAAAKKAPA
KKATAAKKTAAKKATAAKTTAAKKTTTAKKTAAKKATASKTASDD
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctcggccccggatacgtcgtcgaggcgagcgtc
gggcacatccgcgacctccccaacggcgccgcggaggtgccggagaagtacaccggcgag
gtccggcgcctcggtgtggacgtagagcacgacttccagccgatctatgtggtcaacgcc
gacaagaaggcacaggtcaagaagctcaaggacctgctgaaggactccgacgagctcttc
ctcgccaccgatgaggaccgggagggcgaggccatcgcctggcacctccaggaggtcctc
aagccgaagatcccggtcaagcgcatggtgttccacgagatcaccaaggacgcgatccgg
gaggccgtggccaatccgcgccagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctacggctacgaggtgtcgccggtcctgtggaagaaggtcatg
ccacgcctgtcggccggccgcgtccagtcggtcgcgacccggctcgtggtggagcgggaa
cgcgagcgcatcgcgtttcgttcggctgagtactgggacctgacgggcaccttcgcgacc
ggccgcgcgggggactcgtcggacccgtcgtcgctggtcgcccgcctccagaccgtcgac
ggcaggcgggtggcgcagggccgcgacttcgactcgctgggacagctcaagagcgcgaac
accctccatctcgacgaggcgaacgcccgcgccctcgccgccgccctggaggacacccgg
ttctccgtccggtccgtcgagtccaagccgtaccgtcgctcgccgtacgccccgttccgt
acgacgacgctgcagcaggaggccagccgcaagctcggcttcggcgcgaaggccacgatg
cagatcgcgcagaagctgtacgagaacggctacatcacgtacatgcgtacggactccacg
acgctgagcgacacggcgatcgccgccgcccgtgcccaggtcacgcagctgtacggcgcc
gactacctgccgccgcagccgcggacgtatgcgggaaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgcccctcgggtgatcgtttccgtacgccggccgagacgggactgacc
ggtgaccagttcaagctgtacgagctgatctggaagcggacggtcgcctcccagatgaag
gacgcgacgggcaactccgtcacggtgaagatcggcggcaccgcggccgacggcagggac
gtcgagttcagcgcgtccggcaagacgatcaccttccacggcttcctgaaggcctacgtc
gagggcgccgacgacccgaacgccgagttggacgaccgggagcgccggctgccgcaggtc
gtcgagggcgacccgctgtcggccgaggagatcacggtcgacgggcacgccaccaagccc
cccgcccgctacaccgaggcctcgctggtcaaggagctggaagagcgcgagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggctatgtgttcaagaag
ggcacggcactcgtcccgtccttcctgtccttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcaccgcgaagatggaggacgatctcgaccgcatc
gcgcgcggcgaggcgcaggccgtgccgtggctgaagcggttctacttcggcgaaggcacg
ggtgcgggcggtgccgcggacgccggcaacggcgacggggaccacctcggcggcctcaag
gagctggtgaccgacctgggcgcgatcgacgcgcgcgaggtgtcctcgttcccggtgggc
aacgacatcgtgctgcgcgtcggccgctacgggccgtacatcgagcgcggtgagaaggac
tccgagggccaccagcgcgccgacatcccgtccgacctggccccggacgaactcaccgtc
gagctcgcggaggagctgctcgccaagccgagcggcgacttcgagctgggcacggacccg
gagaccggccacacgatcgtcgccaaggacggccgctacggcccgtacgtcaccgaggtg
ctgcccgagggcaccccgaagacgggcaagaacgccgtcaagccgcgtacggcctcgctg
ttcaagtcgatgtcgctggacacagtgacgcttgaggacgcgctgaagctgatgtcgctt
ccgcgggtcgtgggcaccgacgcggacggcgtcgagatcaccgcgcagaacggccgctac
ggcccgtatctgaagaagggcacggactcgcggtcgttgcagtccgagggccagctcttc
acgatcacgctggaggaggcgcaggcgatctacgcccagccgaagcagcgtggccgtgcg
gccgccaagccgccgctgaaggagctgggcgaggacccggtcagcggcaagccggtcgtc
gtcaaggacggtcgcttcggcccgtacgtcaccgacggcgagaccaacgcgaccctgcgc
tcgggcgacagtgtcgagacgatcaccccggagcgcggtttcgaactgctcgccgagaag
cgtgcgaaggggcccgccaagaagacggccaagaaggcggccgcgaagaaggctcctgcg
aagaaggcgacggccgcgaagaagaccgcagccaagaaggcgaccgcggcgaagacgacc
gccgcgaagaagaccacgacggccaagaagacggccgccaagaaggcgacggcttcgaag
acggcgtcggacgactga
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