Streptomyces flavusporus: ACKTSN_25575
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Entry
ACKTSN_25575 CDS
T11144
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sflu Streptomyces flavusporus
Pathway
sflu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sflu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACKTSN_25575 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sflu03019
]
ACKTSN_25575 (groL)
03110 Chaperones and folding catalysts [BR:
sflu03110
]
ACKTSN_25575 (groL)
03029 Mitochondrial biogenesis [BR:
sflu03029
]
ACKTSN_25575 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sflu04147
]
ACKTSN_25575 (groL)
Enzymes [BR:
sflu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ACKTSN_25575 (groL)
Messenger RNA biogenesis [BR:
sflu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACKTSN_25575 (groL)
Chaperones and folding catalysts [BR:
sflu03110
]
Heat shock proteins
HSP60 / Chaperonin
ACKTSN_25575 (groL)
Mitochondrial biogenesis [BR:
sflu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ACKTSN_25575 (groL)
Exosome [BR:
sflu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ACKTSN_25575 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ACKTSN_25575 (groL)
Exosomal proteins of breast cancer cells
ACKTSN_25575 (groL)
Exosomal proteins of colorectal cancer cells
ACKTSN_25575 (groL)
Exosomal proteins of bladder cancer cells
ACKTSN_25575 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
Motif
Other DBs
NCBI-ProteinID:
XLX08814
LinkDB
All DBs
Position
5384716..5386338
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSGALLDQAKEVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEASLEDPYILIANSKISNVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVIS
EEVGLKLENATLDLLGRARKVVITKDETTIVDGAGSADQVAGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SQVFEKLELEGDEATGAQAVKLALEAPLKQIAVNAGLEGGVVVEKVRGLTPGHGLNAATG
EYVDLVKEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAPAGGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtcaaggtcaccctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccacggcgaccgtgctcgcccaggccctggtcaag
gagggcctgcgcaacgtcgccgccggcgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccggtgcgctgctcgaccaggccaaggaggtcgagaccaag
gagcagatcgcctccacggcctccatctccgccgccgacacccagatcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcgcagacc
ttcggtctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcgcatggaggcgtcgctcgaggacccctacatcctcatc
gccaactccaagatctccaacgtcaaggacctgctcccgctcctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgcaaggccatgctcggcgacatcgccatcctcacgggcggcgaggtcatctcc
gaggaggtcggcctcaagctggagaacgcgaccctggaccttctgggccgcgcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgacggcgccggctccgccgaccaggtc
gccggccgggtcaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctccaggagcgcctggcgaagctggccggcggcgtggccgtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcc
tcccaggtgttcgagaagctggagctcgagggtgacgaggcgaccggcgcccaggccgtg
aagctcgcgctcgaggccccgctgaagcagatcgccgtcaacgccggcctcgagggcggc
gtcgtggtcgagaaggtgcgcggcctgaccccgggtcacggcctgaacgccgcgaccggt
gagtacgtcgacctggtcaaggaaggcatcatcgacccggcgaaggtgacccgctctgct
ctgcagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcgcccgccggcggcggcatgccgggcggtgacatggacttc
tga
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