Streptomyces flavusporus: ACKTSN_28425
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Entry
ACKTSN_28425 CDS
T11144
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sflu Streptomyces flavusporus
Brite
KEGG Orthology (KO) [BR:
sflu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sflu03021
]
ACKTSN_28425
Transcription machinery [BR:
sflu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACKTSN_28425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
MarR_2
HTH_24
HTH_3
Sigma70_ECF
DUF7343
HTH_AraC
MarR
HTH_20
Apolipoprotein
DUF1492
KORA
Motif
Other DBs
NCBI-ProteinID:
XLX09310
LinkDB
All DBs
Position
complement(5998299..5999246)
Genome browser
AA seq
315 aa
AA seq
DB search
MSPRLDASHTRTATSTPPPEHLDPIERNGDHTDTLAVRDDVLALQDDVLAGLPEIPPYDE
VGPVDARALSKTLFERLESLEEGTHEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDII
QVGTIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAK
AGDELAQQLDRAPTVGELAERLGISHDEVVEGMAASNAYTASSLDAQPEEDDSEGALADR
IGYEDHGLEGIEYVESLKPLIAELPHRDRKILSLRFVANMTQSEIGDELGISQMHVSRLL
SRTLGRLRKALTVEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcatcgcacacccggacggcgacgtcgacaccccctccggaa
catctggatcccatcgagcgtaacggcgatcacaccgacacactcgccgtcagggacgac
gtactcgccctgcaggacgacgtactcgccggacttccggagatccccccgtacgacgag
gtcggccccgtcgatgcacgggccctgtccaagaccctcttcgagcggctggaatccctc
gaggaaggcacgcacgagtactcgtacgtccgcaacacgctcgtcgaactcaacctcgcc
ctggtcaagttcgccgcctcccggttccgctcccgcagcgaaccgatggaggacatcatc
caggtcggcacgatcggcctgatcaaggcgatcgaccgcttcgaactcagccgcggcgtc
gagttcccgaccttcgcgatgcccaccatcgtcggcgagatcaagcgcttcttccgcgac
acctcgtggtcggtgcgcgtgccgcgccggttgcaggaactccgcctcgacctggccaag
gccggtgacgaactggcccagcagctggaccgcgcccccacggtgggagaactggccgag
cgcctgggcatctcccacgacgaggtcgtcgagggcatggccgcgtcgaacgcgtacacc
gcctcgtcgctggacgcccagcccgaggaggacgacagcgagggtgcgctcgcggaccgg
atcggctacgaggaccacgggctcgaaggcatcgagtacgtcgagtcgttgaagccgctg
atcgccgaactcccgcaccgggaccggaagatcctctccctccgcttcgtcgccaacatg
acccagtccgagatcggcgacgaactcggtatctcgcagatgcacgtgtcgcggctgctg
tcgcgcacgctggggcgactgcgcaaggcgctgacggtcgaggagtga
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