Sphingosinicella flava: IC614_03455
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Entry
IC614_03455 CDS
T09809
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sflv
Sphingosinicella flava
Brite
KEGG Orthology (KO) [BR:
sflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sflv03016
]
IC614_03455 (rnd)
Enzymes [BR:
sflv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IC614_03455 (rnd)
Transfer RNA biogenesis [BR:
sflv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IC614_03455 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QPQ55666
UniProt:
A0A7T2GKQ9
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All DBs
Position
complement(652933..654108)
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AA seq
391 aa
AA seq
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MHIHPLITDSESLAALCKRLSTASFVAVDTEFMRENTYWPDLCLIQIGDQFEAAAIDPKA
EGLDLTPLLDLLVNNDEVLKVFHAGGQDIEIIHNLTGKTPYPLFDTQVAAMALGLGEQVG
YSNLVESLLNERLDKGARFTDWGRRPLDKRQIDYAIGDVTYLAGLFPKMLERLKKTGRGA
WLNQEMERLADPANYCVDPDQAWKRIRMPSRKAEVLGRLKAVAAWREKEARGKNLPRGRI
MKDETLADIASHPPKSQDALANVRGLSPTWKSNDIGARLMQAIADARELPADEMPPKEER
MPGLGKEGALVADLLKLLLKIRSRESNVAARLIAKSEELEALAAGKRNGLSILEGWRFDE
FGRDALDLVEGRLAFAIKKGRLAMTRTEAAE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcatatccatccgttgattaccgacagcgaatcgctcgccgccctttgcaaacgcctc
tccaccgccagcttcgtcgctgtcgatacggagttcatgcgggaaaatacctattggccc
gatctgtgcctgatccagatcggcgaccagttcgaggctgcagcgatcgaccctaaagcg
gaaggacttgatcttacccccctgctcgacctcctcgtcaacaatgatgaggttctgaag
gttttccatgcgggcgggcaggatatcgagatcatccacaatttgaccggcaagacgcct
tatccgttattcgatacgcaagtcgccgcgatggcgctggggcttggcgagcaggtcggt
tattcgaacctcgtcgaaagcctattgaacgagcggctcgacaagggcgcgcgcttcacc
gattggggccgccgcccgctcgacaagcgccagatcgattatgcgatcggcgacgttacc
tatctcgccgggctcttccccaagatgctggagcgtctcaagaaaaccggccgcggcgcc
tggcttaatcaggagatggagaggctcgccgatcccgccaattattgcgtcgatcccgac
caggcatggaagcgcatccgcatgccgagccgcaaggccgaggtgctgggacgcctgaag
gccgtcgccgcgtggcgcgaaaaagaagcgcggggcaagaatctgccgcgcgggcggatc
atgaaggacgagacgctggccgacatcgcctcgcacccgccgaagagccaggatgcgctg
gccaatgtgcgcggcctctcgccgacctggaaatcgaacgacatcggcgcgcggctcatg
caggcgatcgcggatgccagggagctgcccgccgacgaaatgcccccgaaggaggagcgc
atgcccggtctgggcaaggaaggcgcgctcgtcgccgatctcctgaagctcctcctcaaa
atccgctcgcgcgaaagcaatgtcgcggcgcggctcatcgccaaatccgaagaactggaa
gcgctggctgcgggaaaacggaacgggctttcgattctcgaaggctggcggttcgacgaa
ttcggccgcgatgcattggatctggtggaaggccgcctcgccttcgcgatcaagaagggc
cggctcgccatgacgcgtacggaggcggccgaataa
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