Sphingosinicella flava: IC614_04520
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Entry
IC614_04520 CDS
T09809
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sflv
Sphingosinicella flava
Pathway
sflv03030
DNA replication
sflv03430
Mismatch repair
sflv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IC614_04520 (dnaE)
03430 Mismatch repair
IC614_04520 (dnaE)
03440 Homologous recombination
IC614_04520 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sflv03032
]
IC614_04520 (dnaE)
03400 DNA repair and recombination proteins [BR:
sflv03400
]
IC614_04520 (dnaE)
Enzymes [BR:
sflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IC614_04520 (dnaE)
DNA replication proteins [BR:
sflv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IC614_04520 (dnaE)
DNA repair and recombination proteins [BR:
sflv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IC614_04520 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
COE1_HLH
DUF655
Motif
Other DBs
NCBI-ProteinID:
QPQ55854
UniProt:
A0A7T2LMR4
LinkDB
All DBs
Position
complement(866529..870011)
Genome browser
AA seq
1160 aa
AA seq
DB search
MASNPYVPLRVFSCYTMLDGAIEPKAIAKQAKKLDLPAVALTDRNGLYAAMAFTDACKGE
GVQPIIGAMLAVARPGPSGPQGPMLDWLALYAQDTTGYDNLCALVSAAHLDRPVEEDAHV
GFAALAGRTDGLIALTAGGEGGLARLVAEEQQEAAEAYLTRLEGLFPGRLYIELCRRGME
VEQKAEAGLIDLAYARDLPLVATNPACFADAHFHQAHDAMLCIAQSSQIDRDDRVRSSPE
AWMKPPQDMRELFGDIPEAIDNTAVVAMRCAVGAPKRKPILPSLAGDLEGEADQLRRDAR
AGLEARLAAYNDLGEEARRRYFDRLDFEVDVIVRMGFPGYFLIVADFIKWAKDNDIPVGP
GRGSGAGSVVAWALTITDLDPLKLNLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQQ
KYGRDQVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNHPTDPWTLERALNGV
SELAAEYKNDPQVRRLFDLAMKLEGLPRHSSTHAAGVVIGDRRLDKLVPLYRDPRSDMPV
TQFDMKYVEGAGLVKFDFLGLKTLSVLQKAVQMLAKRGITVDLDRLEWDDEEVYKLLQRG
ETVGVFQLESEGMRRTLAAVKPTNFEDIIALVSLYRPGPMDNIPMFGARKNGREPIEYPH
PLLEGVLKETYGIFVYQEQVMQAAQVLAGYSLGEADLLRRAMGKKIQAEMDAQRERFVTG
CAAHQITPAKANELFDLIDKFAGYGFNKSHAAAYALVAYQTAWLKAHHPVEFYAASMCFD
MHQTDKLAIFVEDMRRLEVPFLPPCINASEAEFSVEAAGEGHAVRYALGALKGVGEKAME
QLCAERDAAGPYQDLDDFAARIDPRLLNRRQLESLAGAGAFDAIARDRAMAFGAAETLLA
AAASAADARISGQGGLFGEGAANVVPIRMPSPQGWSLAERMAQEKEAFGFYFSAHPVDNY
RHLADGHGAKTFAQISALPAPAEGGRSAAVMAGLIEEARWRTSAKGRRYMMGTASDSSGQ
FQFTVFDDAVAAQIEEAAKAGGCGLLNVELDRRPGEETPRIAIRSIQPFESLSKRSRLEM
EVEVDTAEVLTLLSDTLASHREGNGRLMLRLATEGGPVLMLLGRDFCLDAEVAAHIERLP
GVMAVRLIADQNRLALVSNQ
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaacccttacgtcccgctgcgtgtcttttcctgctacacgatgctggacggc
gcgatcgagccgaaggcgatcgccaagcaggcgaagaagctcgacttgcccgccgttgcc
ctcaccgatcgcaacggcctctatgccgccatggccttcaccgatgcgtgcaaaggagag
ggcgtgcagccgatcatcggcgcaatgctcgccgtggcacgtccggggccttccgggccg
caggggccgatgctcgattggctcgcgctctatgcgcaggacacgaccggctacgacaat
ctttgcgcgcttgtctcggccgcccatctcgaccggccggttgaggaagatgcgcatgtc
ggctttgcggccttggccggacgcacggatggcttgatcgcgctgacggcgggcggggag
ggagggcttgcgcgcctcgttgccgaagagcagcaggaggcggcggaagcttatctgacg
cggcttgaggggctgtttccggggcgcctttatatcgaactgtgccggcgcggcatggaa
gtggagcagaaagcggaagcgggcctcatcgacctcgcctatgcgcgcgatctgccgctc
gtggcgacgaacccggcttgcttcgccgacgcgcatttccaccaggcgcacgacgccatg
ctgtgcatcgcccagtcgagccagattgaccgcgacgaccgcgtccgctcttcgcccgaa
gcctggatgaagccgccgcaggacatgcgcgagttgttcggcgacattcccgaagcgatc
gacaatacggccgtcgtcgccatgcgttgcgctgtcggcgcgccgaagcgcaaaccgatc
ctgccgagccttgcgggcgatttggaaggcgaagcggaccagttgcggcgtgatgcccgc
gcgggactggaggcgcggcttgcggcctataacgatctcggcgaagaagcgcggcgacgt
tacttcgaccggctggatttcgaagtggacgttatcgtccgcatgggcttccccggctat
ttcctgatcgtcgccgatttcatcaaatgggcgaaggacaatgatattccggtggggccg
gggcgcggttcaggcgcaggatccgtggtcgcttgggcgctcaccatcaccgacctcgat
ccgctgaaactgaacctgctgttcgaacgcttcctcaatccggaacgcgtgtcgatgccg
gatttcgacatcgacttttgcgaaacccggcgcggcgaagtgatccgctacgtccagcag
aaatatggccgcgatcaggtcgcgcagatcatcactttcggtaagctgaaggcgcgcgcc
gtgttgaaggataccgggcgcgtgctccagatgagctacgggcaggtggaccggctggcg
aaattggtgccgaaccatccgaccgatccctggacactggagcgggcgctgaacggcgtt
tccgagcttgccgccgaatataagaacgacccgcaggtgcggcgcctgttcgatctggcg
atgaagctggaaggcctgccgcgccacagctcgacccacgcggcgggcgtggtgatcggc
gaccggcggctcgacaagctcgtcccgctctatcgcgacccgcgctcggacatgccggtg
acgcagttcgatatgaaatatgtcgagggtgcgggattggtaaagttcgacttcctcggt
ttgaagacgctgtcggttctgcagaaggcggtgcagatgctggccaagcgcgggatcacc
gtcgatctcgaccggctcgaatgggacgatgaggaagtctacaagctcctgcaacgcggc
gagacggtgggcgtgttccagctggaatcggagggcatgcgccgcacgctcgcggcagta
aagccgaccaatttcgaggatatcatcgcgctcgtctcgctctaccggccgggcccgatg
gacaatattccgatgttcggtgcgcgcaagaacgggcgggagccgatcgaatatccgcat
ccgctgctggaaggggtgctgaaggaaacctacggcattttcgtctatcaggagcaggtg
atgcaggccgcgcaggtgctggccggctacagcctcggcgaggcagatctcctccgccgc
gcgatgggcaagaagatccaagcggagatggacgcgcagcgcgagcgcttcgtcaccggg
tgcgcggcacaccagatcacgcccgctaaggccaatgagctgttcgatttgatcgacaag
ttcgcgggttacggcttcaacaagagccacgcggcggcttatgcgctcgtcgcctatcaa
acggcgtggctgaaggcgcatcatccggtcgaattctatgccgcgtcaatgtgcttcgac
atgcatcagacggacaagctcgctattttcgtagaggatatgcggcggctggaggtgccg
ttcctgcccccctgcatcaacgccagcgaggctgaattctcggtcgaagcggcgggtgag
ggccatgccgtccgctacgccctcggcgcgctgaaaggggttggcgagaaggcgatggag
cagctttgcgccgaacgcgatgctgccggaccttatcaggatctcgacgatttcgcggcg
cggatcgatcctcgcttgctcaaccggcggcaactcgaaagcctcgcgggcgctggggcg
ttcgatgcgatcgcgcgcgaccgggcgatggccttcggcgcggctgaaaccctgctggcc
gccgccgccagtgccgccgacgcgcggatcagcgggcagggcgggctgttcggcgaaggc
gcggcgaacgtcgtgccgatccgcatgccctccccgcaggggtggagtctcgccgagcgc
atggcgcaggagaaggaggctttcggtttctatttctccgcccatccggtcgacaattac
cgccatcttgccgacgggcacggggcgaagaccttcgcgcagatttcagctctgcccgca
cccgctgagggcggccggtcggcggctgtcatggcaggattgatcgaggaggcgcgctgg
cggacgtcggccaaaggacgccgctatatgatgggcacggcgtcggattcgtcggggcaa
tttcagttcactgtgttcgacgatgcagtggcggctcagatcgaagaggcggcgaaggcg
ggcggatgcggtctcctgaacgtcgagctcgatcggcggcctggcgaggagacgccgcgt
atcgccatacggtcgatccagccgttcgaaagcctgtcgaagcgcagtcgtctagagatg
gaggtggaggtcgacacggcggaggtgctgacgctgttgtcggatacattggcttctcat
cgtgagggtaacggccgcttgatgttgcggctggcaacggaaggcgggcctgtgctcatg
ctccttggccgcgacttctgcctcgatgccgaagtggcggcgcatatcgagcggctgccc
ggcgtgatggcggtccgcctgatcgccgatcagaatcgactggctctggtttcgaaccaa
tag
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integrated database retrieval system
