Allosphingosinicella flava: IC614_06850
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Entry
IC614_06850 CDS
T09809
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sflv
Allosphingosinicella flava
Pathway
sflv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sflv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IC614_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sflv03021
]
IC614_06850
03400 DNA repair and recombination proteins [BR:
sflv03400
]
IC614_06850
Enzymes [BR:
sflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IC614_06850
Transcription machinery [BR:
sflv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IC614_06850
DNA repair and recombination proteins [BR:
sflv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IC614_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
IDH
Motif
Other DBs
NCBI-ProteinID:
QPQ54089
UniProt:
A0A7T2GHP2
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All DBs
Position
complement(1327900..1328958)
Genome browser
AA seq
352 aa
AA seq
DB search
MAVNAKNWQEMKKPNALEKKAGGDARRKATFVAEPLERGFGLTLGNSLRRVLLSSLQGAA
VTSIKIEGVLHEFSSLAGVREDVTDMVLNVKQVALKMEGEGSKRLSLSATGPGEVTAGQI
AATGDIEVMNPDLVICHLDEGATLNMELTVQAGKGYVPAANNRPADAPIGLIPVDALYSP
VRQVSYKVENTRVGQELDYDKLTLTVETDGTISPDDAIAYAARILQDQLQLFVHFDEGLA
AAAPSAGVSMTAMETESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEA
EMLRTPNFGRKSLNEIKEVLSGMGLRLGMDIPGWPPENIEEMAKKLEQELMG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcaacgcaaagaactggcaggaaatgaagaagcccaacgctctggagaagaag
gcgggtggcgacgcccggcgcaaggcgaccttcgtcgccgagccgcttgagcgcggcttc
ggcctgacgctcggcaactcgctgcgccgcgtccttctttcttcgcttcagggcgctgcc
gtcacgtcgatcaagatcgaaggcgtgctgcacgaattttcgagcctcgcgggcgtccgc
gaagacgtgaccgacatggtcctcaacgtgaagcaggttgcgctgaagatggaaggcgaa
ggctcgaagcgcctgtcgctgtcggccaccggccccggcgaagtcaccgccggccagatc
gcggccacgggcgatatcgaggtgatgaaccccgatctcgtcatctgccatctggacgaa
ggcgcgacgctcaacatggaactgacggttcaggccggcaagggctatgtccccgccgcc
aacaaccgtccggccgacgcgccgatcggcctcatcccggtcgatgcgctctactcgccg
gtgcgccaggtcagctacaaggttgaaaacacccgcgtcggccaggaactcgactatgac
aagctgacgctcaccgtcgaaaccgacggcacgatcagcccggacgatgcgatcgcctat
gcggcccgcatccttcaggaccagctccagctgttcgtccacttcgacgaaggcctggcc
gccgccgcgccgagcgccggtgtttccatgaccgccatggaaaccgaaagcgacgcgaac
cagctcaaccgctatctcttgaagaaggtggacgagctggaactgtcggtccgcagcgcc
aattgcctgaagaacgacaacatcatttacatcggcgacctcgtccaaaagaccgaggcc
gagatgctccgcacgccgaatttcgggcgcaagagcctcaacgagatcaaggaagtgctg
tccggcatgggcctccgcctcggcatggacattccgggctggccgcctgaaaatatcgag
gaaatggccaagaagctcgaacaggaattgatgggctaa
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