Allosphingosinicella flava: IC614_09115
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Entry
IC614_09115 CDS
T09809
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sflv
Allosphingosinicella flava
Pathway
sflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC614_09115 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sflv03019
]
IC614_09115 (recQ)
03400 DNA repair and recombination proteins [BR:
sflv03400
]
IC614_09115 (recQ)
Enzymes [BR:
sflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IC614_09115 (recQ)
Messenger RNA biogenesis [BR:
sflv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IC614_09115 (recQ)
DNA repair and recombination proteins [BR:
sflv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IC614_09115 (recQ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QPQ54495
UniProt:
A0A7T2GIH6
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All DBs
Position
1781562..1783325
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AA seq
587 aa
AA seq
DB search
MQDPLDILHTTFGFSDFRGVQAQVVDRVMAGQHTLAVMPTGAGKSLCYQVPALARPGTAL
VISPLIALMHDQIRSAEGFGIRAASLTSADDNRQETLARFRAGELDLLYAAPERASSESF
RNLIAQVPLALIAIDEAHCVSEWGHDFRPDYRLLRPLLDRFPGVPRLALTATADRQTRED
ILHQLGIPDEGLIVAGFDRPNIRYHIRPRDGLSGQLQTLLANQPGAGIVYAPTRAAAEKI
AEQVGKMGRPTGVYHAGLDPGVRARAQAAFVQSEDMVMVATIAFGMGIDKPDVRFVAHAG
LPKSIEAYYQETGRAGRDGDPSEAHLFWGAEDFSRARARVESEVPEDRRGGERQRLNAMG
ALVEAAGCRRAILLRHFGETPPESCGNCDNCLEPPQAVDATEIARKLLSAAFRTEMRFGI
GHLTDVLAGKETDKIHNFAHHRLSVFGIASEDELPLIKPVARALMARDALRADEYGGLSF
GPGARAILKGEEAVEIVLPPKRERRRKRRDAADYPHDPLFEALRACRRDLAKEQDVPPYV
IFHDSTLREMAELKPASLDALSRISGVGVAKLEKYGAAFVAVVRDHQ
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagaccctctcgacattctccacacgaccttcggcttctccgattttcgcggcgtt
caggctcaagtcgttgatcgcgtcatggccgggcagcatacgctcgcggtgatgccgacc
ggcgcggggaaatcgctttgctatcaggtgcctgcgctcgcccggcccggaacggcgctg
gttatttccccgctcatcgcgctgatgcacgatcagattcgttcggcggaagggttcggt
attcgtgccgcatccctgacgtccgccgacgataaccggcaggagacgctcgcccgcttc
cgggcgggagaactggatctcctttatgctgctccggaacgcgcatcgagcgagagcttc
cgcaacctgatcgctcaagtgccattagcgctgatcgcgatcgacgaggcgcattgcgtg
agcgaatggggtcatgatttccggcccgattaccgtctgctccgccctttgctcgaccgc
tttccaggcgtgccgcgcctggcgctgacggcgacggcggaccggcagacgcgggaggat
attctccaccagctcggcattcccgatgaggggctgatcgttgccgggttcgaccggccg
aatatccgctatcatatccggccacgcgatggcctgtcgggccagttgcaaaccctgctc
gccaaccagccgggggcaggcatagtctatgcgccaacccgtgcggcggccgaaaagatc
gcggagcaggtcggcaagatggggcgtcccacgggggtctatcatgccggtctcgatcct
ggggtgcgggcacgggcgcaggcggcattcgtgcagagcgaagacatggtgatggtcgcg
accatcgctttcggcatggggatcgataagccggacgtgcgcttcgtcgctcatgccggc
ctcccgaagtccatcgaggcttattatcaggaaacgggccgcgcgggccgcgacggagac
ccatcggaagcgcatcttttctggggagccgaagacttttcccgcgctcgcgcccgggtc
gaaagcgaggtgcccgaggatcgtcgtggcggggagcggcagcggctcaacgcgatgggc
gcgctggtcgaggcggcgggatgccgccgcgcgattctgctccgccactttggagagacg
ccccccgaaagctgcggcaattgcgacaattgcctggagccgccccaggcggtggacgcg
accgaaatcgcccgcaagttgctttccgccgccttccgcaccgaaatgcggttcggcatc
ggacacctgaccgacgtgctggccggcaaggaaaccgacaagatccataatttcgctcat
caccgcctgagcgtcttcggcattgcaagcgaggacgaactgccgctcatcaagcctgtc
gcgcgcgcattgatggcgcgcgacgcgctgcgcgccgacgaatatggcggcctttccttc
ggcccgggcgcccgtgcgatcctgaagggtgaggaggccgtggagatcgtcctgccgccc
aaaagagaacgccgccgcaaaaggcgcgacgcggccgattacccgcacgatccgcttttc
gaggctcttcgcgcgtgccgccgcgacctcgcgaaggagcaggacgtgccgccttatgtc
atcttccacgacagcacgcttcgcgaaatggcggaattgaaaccggcaagcctggatgcc
ctttcgcgcatttccggcgttggtgtggcgaagctggagaaatatggcgcggccttcgtc
gcggtcgtgagggatcatcaatga
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