Allosphingosinicella flava: IC614_10695
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Entry
IC614_10695 CDS
T09809
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sflv
Allosphingosinicella flava
Pathway
sflv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sflv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC614_10695 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sflv03019
]
IC614_10695 (pnp)
03016 Transfer RNA biogenesis [BR:
sflv03016
]
IC614_10695 (pnp)
Enzymes [BR:
sflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IC614_10695 (pnp)
Messenger RNA biogenesis [BR:
sflv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IC614_10695 (pnp)
Transfer RNA biogenesis [BR:
sflv03016
]
Prokaryotic type
tRNA degradation factors
IC614_10695 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
ManC_GMP_beta-helix
S1_2
Motif
Other DBs
NCBI-ProteinID:
QPQ54779
UniProt:
A0A7T2GJ15
LinkDB
All DBs
Position
2092963..2095281
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AA seq
772 aa
AA seq
DB search
MFDTKKVEIEWGGKTLTLETGKVARQADGAVIATLGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLVSRLIDRPIRPLFPEGFYNEINVIAQVLSY
DGENEPDILAMIAASAALTISGVPFMGPIGAARVGYDGENYQLNPTDEMVDAGLLDLVVA
ATGDAVMMVESEAKELSEEVMLGAVMFAHKEIGKVVNAIISLAEKAAKDPWELSTGDDNA
AVKAELKKLIGDDIAAAYKTTLKSDRANMLNAARAKAKEAMADKSPQEQMVAMKLVKKIE
ADIVRTAILKDGRRIDGRDTKTVRPIVAEVGFLPRTHGSALFTRGETQTIATCTLGTKDA
EQMIDGLNGLSYQHFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHAVLPTKDEF
PYTIRLTSDITESNGSSSMASVCGGSLAMMDAGVPIKRPVSGIAMGLILEGKDFAVISDI
LGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITEEIMRTALEQAKEGRAHILGEMAKAL
DTTRTELSAHAPRIETMQIDKSKIREVIGTGGKVIREIVAETGAKVDIDDEGLIKISSSD
LSQIEAAKKWIQGIVEEAEVGKIYTGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVEK
PTDVVSEGMEVKVKVLEVDPRGKVRLSMRVVDQETGAELEDTRPPREERPRGERGERRDR
GPRRDGEGRGDRGDRGGRSRGGDRDRGPRRERSENEGPEPEFAPAFLKRDDD
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataccaagaaagtagaaatcgagtggggcggaaagaccctgacactcgaaacg
ggcaaggttgcccgccaggccgacggcgcggtgatcgcgaccctcggcgaaaccgtcgtg
ctttgcgccgtcacggccgcgaagtcggtgaaggaaggtcaggatttcttcccgctgacc
gtccactatcaggaaaagttttcggccgccggacgcattccgggcggtttcttcaagcgc
gagcgcggcgcgaccgagaaggaaaccctggtttcccgcctgatcgaccgtccgatccgt
ccgctcttcccggaaggcttctacaacgaaatcaacgtcatcgcccaggtgctgagctat
gacggcgaaaacgaacccgacattctggcgatgatcgcggcctcggccgcgctcaccatt
tcgggcgttccgttcatgggcccgatcggcgccgcccgcgtcggttatgacggcgagaat
tatcagctcaacccgaccgacgaaatggtcgacgccggtcttctcgatctcgtcgtcgcg
gcgaccggcgatgcggtgatgatggtcgaatccgaagccaaggagctttcggaagaagtc
atgctcggcgccgtcatgttcgcgcacaaggaaatcggcaaggtcgtcaatgcgatcatc
agcctcgctgaaaaggcggccaaggatccgtgggagctgagcaccggcgacgacaatgct
gccgtcaaggcggaattgaagaagctgatcggcgacgatatcgccgccgcctacaagacg
acgctgaagtcggatcgcgccaatatgctcaacgcggcccgcgccaaggcgaaggaagcc
atggccgacaagagcccgcaggagcagatggtcgccatgaagctcgtcaagaagatcgag
gcggacatcgtccgcaccgcgatcctcaaggacggccgtcgcatcgacggccgcgacacg
aagaccgttcgcccgattgtggcggaagtcggctttctgccgcgcacccacggctcggcg
ctcttcacgcgcggcgagacccagaccatcgcgacctgcacgctcggcaccaaggacgcc
gagcagatgatcgacggtttgaacggcctctcctaccagcacttcatgctgcactataac
ttcccgccttattcggtcggcgaagtgggccgcttcggcgccccgggccgccgcgaagtc
ggccacggcaagctcgcctggcgcgcgctgcacgccgtgctgccgacgaaggacgagttc
ccctatacgatccgcctcaccagcgacatcaccgagtccaacggctcgtcgtcgatggcg
tcggtctgcggcggcagtctcgcgatgatggacgccggcgtgccgatcaagcgtccggtt
tccggcatcgccatgggcctcatcctcgagggcaaggatttcgccgtgatctccgacatc
cttggcgacgaggatcatctcggcgacatggacttcaaggtggcgggcacgtccgaaggc
atcaccacgatgcagatggacatcaagatcgccggcatcaccgaggaaatcatgcgcacc
gcgcttgagcaggccaaggaaggccgcgcccacatcctcggcgaaatggccaaggccctc
gacaccacccgcaccgagctttcggcccacgcgccgcggatcgagacgatgcagatcgac
aagtcgaagatccgcgaagtcatcggcacgggcggcaaggtgatccgcgagatcgtcgcg
gaaaccggcgccaaggtcgacatcgacgatgaaggcctgatcaagatcagctcctccgac
ctcagccagatcgaggccgcgaagaagtggatccagggcatcgtggaagaggccgaagtc
ggcaagatctacaccggcaaggtcgtcaacatcgtcgatttcggcgcgttcgtgaacttc
atgggcggcaaggacggtctcgtccacgtctccgaaatgaagaatgagcgcgtcgaaaag
ccgaccgacgtcgtgtccgagggcatggaagtgaaggtcaaggttctcgaagtcgatccg
cgcggcaaggtccgcctgtcgatgcgcgtcgtcgaccaggagactggcgctgagttggaa
gacactcgtccgccgcgtgaagagcgtccgcgcggcgagcgtggcgagcgccgcgaccgt
ggcccgcgccgcgacggcgaaggccggggcgaccggggtgatcgtggcggccgtagccgt
ggtggagaccgcgatcgcggcccgcgccgcgagcgttcggagaatgagggtccggaaccc
gaattcgcccccgccttcctgaagcgcgacgacgattga
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integrated database retrieval system
