Allosphingosinicella flava: IC614_12250
Help
Entry
IC614_12250 CDS
T09809
Name
(GenBank) HAMP domain-containing protein
Organism
sflv
Allosphingosinicella flava
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
DUF5983
FliE
GAF
Motif
Other DBs
NCBI-ProteinID:
QPQ55051
UniProt:
A0A7T2GJI9
LinkDB
All DBs
Position
2406393..2412182
Genome browser
AA seq
1929 aa
AA seq
DB search
MEEQAGQCRAVRGNEAGTCRLFVQERHLVNAETRVETFDRRQLLTALRAFRKGDFSVRLP
EDGAGADGEIAQLFNEIVGLNEQMTHEFSRLSQVVGKEGKIHQRGRVKGGSGDWDSAVHS
VNELIEDLVQPTAEVSRVIGAVAKGDLSQTMSVEIDGRPLRGEFLRIGKVVNTMVEQLAS
FASEVTRVAREVGTEGKLGGQANVKGVAGTWKDLTDNVNLMAANLTGQVRNIAEVTTAVA
KGDLSKKITVDVRGEVLELKNTINVMVDQLNGFASEVTRVAREVGTEGKLGAQAQVPGVA
GTWADLTDNVNLMADNLTGQVRNIAEVTTAVAKGDLSKKITVDVKGEVLELKNTINTMVD
QLNSFASEVTRVAREVGTEGKLGAQAQVEGVGGTWKDLTDNVNLMAANLTGQVRNIAEVT
TAVALGDLSKKITVDVKGEILELKNTINVMVDQLNAFASEVTRVAREVGTEGKLGGQAQV
PGVAGTWKDLTDNVNLMAANLTGQVRNIAEVTTAVARGNLSKKITVDVRGEVLELKNTIN
VMVDQLNSFASEVTRVAREVGTEGRLGGQAQVEGVAGTWKDLTDNVNAMAGNLTGQVRNI
AEVTTAVAKGDLSKKITVDVKGEVLELKNTINVMVDQLNSFASEVTRVAREVGTEGKLGA
QAQVEGVGGTWKDLTDNVNAMAANLTGQVRNIAEVTTAVALGDLSKKITVDVKGEILELK
NTINVMVDQLNAFASEVTRVAREVGTEGKLGGRAQVRGVAGTWADLTDNVNLMADNLTGQ
VRNIAEVTTAVARGDLSKKITVDVKGEVLELKNTINVMVDQLNSFASEVTRVAREVGTEG
KLGAQAQVPGVGGTWKDLTDNVNLMANNLTNQVRGIADVVTAVAQGNLKRKLAVEARGEI
AALAETINFMIDTLSTFGDQVTSMAREVGIEGKLGGQASVPGAAGLWRDLTDNVNQLAAN
LTNQVRSIADVATAVTKGDLSRSIAVEASGEMAALKDNINEMIRNLKEQTLKNAEQDWLK
TNLARFSRMLQGERDLTTVSSLIISELAPLVNAQYGVFYVAKRDGDETVLELAASYGAER
PDALKPTFHLREGLVGQCAADKRSMLLEEVPADFIRIGSGLGHAAPVNVNIMPAIFEDDV
RAVIELASFSEFNETHLSFLDQLMESVGIVLNTIAATMRTEGLLKQSQLLTTELQARQTE
LTTKQEELHATNEELQEKALLLEYEKKQVEAKNIEIDMARRAVEEKAEQLALTSKYKSEF
LANMSHELRTPLNSLLILSKLLADNPQGNLNEKQTEFARTINAAGTDLLNLINDILDLSK
IESGTVSIDIGDVPLKVLKQNVERTFNQIAQDKGLAFEVEFDSRLPLSMRTDEKRLQQVV
LNLLSNAFKFTSKGSITLSVQSVKKGWTRGLAALDAAEGVIAFAVTDTGIGIPEDKQKLI
FEAFQQADGTTSRRYGGTGLGLSISREIAGLLGGELRVESTPGKGSTFTLFVPQDAMPEA
PANAAEGDQAFEGRLLSAPRAVEQVSDDRANLGDDPFVLIVEDDSTFAGILLEMAHEAGL
KGVVSSAGAGTLAMARKIQPDAITLDLGLADIDGSVLLDLLKHDPETSHIPVHVISGKER
AAAALALGAVGVTEKPASPEALKTIFDSFYQRISRMERTVLTIGSSVAERKALARAVGDP
AIRFEGAVNVTAAAALELDRVHAVLVPAAKAVSIIDDLTDAGDALTGIPLIVFGADAEAP
EVRIAVNRIAVNRDVRVVRTPKALAAMLPSLLRRGRKSDVTAASTGVPEIAGAKILVVDD
DIRNIYSLTSVLETYDATVLYAERGREGIAILEEDPEIDIALIDIMMPEMDGYETMRQIR
QRQGLADLPLIAVTAKAMQGDRQKCLDAGASDYIAKPVDMDLLLALLRVWVGRAKGRTKN
PISAVAIAE
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcaggcggggcagtgtcgcgccgttcgggggaacgaggctggcacttgccgg
ctttttgtgcaggagcgccatctggtgaacgccgaaacccgagtagaaaccttcgatcgc
cgtcaattgctgactgcccttcgcgccttccgcaagggtgatttttccgttcgcctgccc
gaggacggtgccggcgccgacggcgagatcgcgcaattgttcaacgagatcgtcgggctc
aacgaacagatgacgcacgaattttcgcgcctgtcgcaagtggtcggcaaggagggcaag
atccaccagcgcggccgggtgaagggcggcagcggcgattgggacagcgctgttcattcg
gtgaacgagctgatcgaggatctcgtgcagccgaccgccgaagtctcgcgcgtcatcggc
gcggtggcgaaaggcgatctgtcgcaaaccatgtcggtcgaaatcgacggccgcccgctg
cgtggcgaattcctgcgcatcggcaaggtcgtgaatacgatggtggagcagctcgcctcc
ttcgcatcggaagtgacgcgcgtggcgcgcgaagtgggcacggaaggcaaactcggcggc
caggccaacgtgaagggcgtcgcgggcacgtggaaggatctgaccgacaacgtgaacctg
atggccgcgaacctgacgggccaggtgcgcaacatcgccgaagtgacgaccgccgtggcg
aagggcgatctttcgaagaagatcacggtggacgtgcgcggcgaggtgctggagctcaag
aacaccatcaacgtcatggtggaccagctgaatggcttcgcgtcggaagtgacgcgcgtg
gcgcgcgaggtgggtaccgaaggcaagctgggtgcgcaggcgcaggtgccgggcgtcgcg
ggcacctgggcggaccttaccgataatgtgaacctgatggccgacaatttgaccggccag
gtgcgcaacatcgccgaagtgacgaccgccgtggcaaagggcgacctttccaagaagatc
acggtggacgtgaagggcgaggtgctcgagctcaagaacaccatcaataccatggtggac
caattgaactcgttcgcgagcgaagtgacgcgcgtggcgcgtgaggtgggtaccgaagga
aagctcggcgcgcaggcgcaggtggaaggcgtcggcggcacgtggaaggacttgaccgac
aacgtgaacctgatggccgcgaacctcaccggccaggtccgcaacatcgccgaagtgacg
accgccgtggccttgggcgatctgtccaagaagatcacggtggacgtgaagggcgaaatc
ctggagctcaagaacaccatcaacgtcatggtggaccagctgaacgccttcgcgtcggaa
gtgacgcgcgtggcgcgcgaagtgggtacggaaggcaaattgggcggccaggcgcaggtt
ccgggcgtcgcgggcacgtggaaggatctgaccgacaacgtgaacctgatggccgcgaac
ctgaccggccaggtgcgcaacatcgccgaggtgacgaccgccgtggcgcgcggcaatttg
tccaagaagatcaccgtggacgtgcgcggcgaggtgctggagctcaagaacaccatcaac
gtgatggtggaccagcttaactccttcgcctcggaagtgacgcgcgtggcgcgcgaggtg
ggtaccgaggggcgtcttggcggtcaggcgcaggtggaaggcgtcgccggtacctggaag
gatctgaccgacaacgtgaacgccatggccggcaacctgaccggtcaggtgcgcaacatc
gccgaagtgacgaccgccgtggcgaagggcgatctttccaagaagatcacggtggacgtg
aagggcgaggtgctcgagctcaagaacaccatcaacgtcatggtggaccagctcaattcc
tttgcgtcggaagtgacgcgcgtggcgcgcgaggtgggcaccgagggcaaattgggtgcg
caggcgcaggtggaaggcgtcggcggcacgtggaaggatttgaccgacaacgtgaacgcc
atggccgcgaacctcaccggccaggtccgcaacatcgccgaagtgacgaccgccgtggcc
ttgggcgatttgtccaagaagatcacggtggacgtgaagggcgaaatcctggagctcaag
aacaccatcaacgtcatggtggaccagctcaacgccttcgcgtcggaagtgacgcgcgtg
gcgcgcgaagtgggtacggaaggcaagctgggcggccgcgcgcaggtgcgcggcgtcgcg
ggcacctgggccgaccttaccgacaacgtgaacctgatggccgacaatttgaccggccag
gtccgcaacatcgccgaagtgacgaccgccgtggcgaggggcgacctttccaagaagatc
acggtggacgtgaagggcgaggtgctggagctcaagaacaccatcaacgtcatggtggac
caattgaattcctttgcgtcggaagtgacgcgcgtggcgcgcgaggtgggtaccgaaggg
aagctcggtgcgcaggcgcaggtgccgggcgtcggcggcacgtggaaggatctcaccgac
aacgtgaacctgatggcgaacaacctgacgaaccaggtgcgcggcatcgccgacgttgtg
accgccgtggcgcagggcaatttgaagcggaagctcgccgtggaagcgcgcggcgagatc
gcggcgcttgccgagaccatcaacttcatgatcgacacgctgtcgaccttcggcgaccag
gtgacgagcatggcccgcgaggtgggcatcgaaggcaagttgggcggtcaggcgtcggtg
cccggcgccgcgggcctgtggcgcgatctcaccgacaacgtgaaccagctcgcagcgaac
ctcacgaaccaggtgcgctccatcgccgacgtggcgaccgccgtgacgaagggcgatctg
tcgcgctccatcgcggtggaagcgtcgggcgagatggccgcgctcaaggacaacatcaac
gagatgatccgcaacctcaaggaacaaaccttgaagaatgcggagcaggattggctcaag
accaacctcgcgcggttcagccgcatgctgcagggcgagcgcgacctcaccaccgtgtcg
agcctcatcatttccgaactggcgccgctcgtgaacgcgcaatatggcgtcttctatgtc
gccaagcgcgacggtgacgaaacggttctggagctggcggcgagctatggcgcggaacgc
ccggacgcgctgaagccgaccttccacctgcgcgagggactggtcggccagtgcgcagcg
gacaagaggtcgatgttgctggaggaagtgccggcggatttcatccgtatcggctccggc
ctcggtcatgcggcgccggtcaacgtcaacatcatgcccgccattttcgaagacgatgtg
cgggcggtgatcgagctcgcatcgttcagcgagttcaacgaaacccacctgtccttcctc
gaccagctgatggaatcggtcggtatcgtcttgaacacgatcgccgcgacgatgcgcacg
gaaggccttttgaagcagtcgcagctgctgacgaccgagcttcaggcgcgccagaccgag
ctcaccaccaagcaggaggaattgcacgccacgaacgaggagttgcaggaaaaggcgctg
ctcctcgaatatgagaagaagcaggtcgaagcgaagaatatcgaaatcgacatggcccgc
cgcgcggtcgaggagaaggccgagcagctggcgctgacgtcgaagtacaagtccgaattc
cttgccaacatgagccacgaattgcggacgcccctcaattcgctgctcatcctgtcgaag
ctgctggccgacaatccgcagggcaatctcaatgagaagcaaaccgaattcgcgcgcacg
atcaacgcggccggaaccgaccttctcaatctgatcaacgacatcctcgatttgtcgaag
atcgaatccggtactgtttcgatcgacatcggcgatgtgccgctcaaggtcttgaagcag
aatgtcgagcgcaccttcaaccaaatcgcgcaggacaagggcctggcgttcgaggtcgaa
ttcgacagccgcttgccgctgtcgatgcggaccgacgaaaagaggcttcagcaggtcgtt
ctcaacctgctttccaacgccttcaaattcacgtcgaaaggctcgatcaccctctcggtc
cagagcgtcaaaaagggctggaccaggggcttggccgcgctcgacgccgccgaaggcgtc
atcgccttcgcggtcaccgacaccggcatcggcattccggaagacaagcagaagctgatc
ttcgaggccttccagcaagcggacggcacgacgagccgccgctatgggggcacagggctc
ggcctgtccatcagccgcgagattgccggtcttctgggcggcgagctgcgggtggaatcg
acgcccggcaagggatcgacgttcactctcttcgtgcctcaggacgccatgccggaagcc
ccggccaatgccgccgagggggatcaggcctttgaagggcgtttgttgtctgcgccgcgc
gccgtcgagcaggtgtcggacgaccgcgcgaaccttggcgacgatccgttcgtgctgatc
gtggaagacgattcgaccttcgcgggcattctgcttgaaatggcgcatgaggcggggctg
aagggcgtcgtgtcatcggccggcgcgggcacgctggccatggcgcgcaagattcagccc
gacgcgatcaccctcgatctcggcctcgccgacatcgacggctccgtgttgctcgatctc
ttgaagcacgatccggaaacgagccacatcccggtccatgtcatttcgggcaaggagcgg
gcggcggcggcgctcgcgctgggcgcggtcggcgtgacggagaagccggcttcgcccgag
gcgctcaagacgattttcgacagtttctatcaacgcatcagccgcatggaacgcacggtg
ctcaccatcggcagcagcgtcgccgagcggaaggcgctggcccgggcggtcggcgatccg
gcgatccgtttcgaaggggcggtcaatgtcacggccgccgccgccctggaactcgaccgg
gtccatgcggtcctcgttccggccgcgaaagcggtcagcatcatcgacgatctgaccgat
gccggagacgcgctgaccggcattccgctcatcgtcttcggggccgacgccgaagcgccc
gaagtccgcatcgccgtcaaccgcatcgccgtcaatcgcgacgtgcgcgtggttcgcacg
cccaaggcgctcgcggccatgctgccttcgcttctgcgccgcggcaggaagagcgatgtc
accgccgcgtcgaccggcgttcccgaaatcgccggcgccaagatcctcgtcgtcgacgac
gacatccggaacatctattcgctcacaagcgtcttggagacttatgacgcgaccgtcctt
tacgccgagcgcgggcgggaggggatcgcgatcctcgaagaagacccggagatcgatatc
gcccttatcgacatcatgatgccggaaatggacggttacgagaccatgcggcagattcgc
cagcggcagggactggcggacctgccgctcatcgccgtgaccgcaaaggcgatgcagggc
gaccggcagaagtgcctggacgccggagcgtccgattatatcgcgaagccggtcgacatg
gatcttctgctcgccttgctccgggtctgggtcgggcgcgccaaggggcggaccaagaac
ccgatttccgccgtcgcgatcgcggagtga
DBGET
integrated database retrieval system
