Scleropages formosus (Asian bonytongue): 108918283
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Entry
108918283 CDS
T04919
Name
(RefSeq) protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108918283
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108918283
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108918283
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108918283
Cell adhesion molecules [BR:
sfm04515
]
Cadherins
Protocadherins
108918283
BRITE hierarchy
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GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
EphA2_TM
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
108918283
NCBI-ProteinID:
XP_029113870
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Position
14:4071820..4203688
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AA seq
1234 aa
AA seq
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MDPKDFYLLATLVTCFWLDPAIAQELIYPIREELQENTLIGNIPKDLNISHTNSATGASA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSYEDSECSFEIEVVVLPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDMGFNSVQHYEL
VNGQNAFGLDIVETPEGEKWPQLIVEQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNQPIFKESQIEVHIPENSPVGTSVVQLQATDADIGPNADIRYVYGSQVSLATKT
LFSLNSTTGLITVQRPLDREESAIHKMVVLASDGSSTPARANIVINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPVNTKIALITVSDRDTDVNGKVICFIEKDVPFHLKAVYDNQYLL
ETSSLLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFNQPVIELAVMEN
NKRGMFLTTISAVDEDSGKNAEIVYQLGPNASFFDLDRKTGILTASRVFNREDQERYLFT
VTARDNGTPPLQSQAAVIVTIQDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADA
GENAVVTLSILNDYENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGQPPCSSSAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NNGLFRIDPVTGNITLEEKPSVADIGLHRLVVNISDLGYPKSLYTLVLVFLYVNDTVGNA
TYIYDLIRRTMETPLDKNIGDSGETYPSGDYLTIMIAIVAGAMVVIVVIFVTILLRCRHV
SRFKAAQRKKQGAEWMSPNQENKQNKKKKRKKRKSPKNSLLNFVTIEETKPDDPMHKPIN
GTISLPAELEEQGIGRFDWSSAPTSTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVVQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGSLHTRQGTLTRARTE
LNPEYLDLRSRTELNPEYWTPCTPLSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLLS
HPLPLVQPQEDFYEQASPDKRTEADGNSDPNSDGPLGPRGLVEATEMCTQECLVLGHSDN
CWMPPSLGTYQQPKSPISAFANQKDWAKDKLLNGHTLTRTWKSEGSRDQFEDRKQFGSAE
GHFTQAGHMTDIPLASLKSYKQAMGPDSPKEHQL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggaccctaaggatttttacctgttggccactctggtcacctgcttttggttagatcca
gctatagcccaggagctcatctaccctattagagaggagttgcaagaaaatactctcatt
ggaaacataccaaaggatctgaacatttctcatacaaactctgccactggagccagtgct
aatctggtttacaggctggtttctaaagctggggataaccccttagtgagagttttaagc
agtactggggagatctttacaacttctaaccgcatcgatagggagaaactgtgccctggc
ccttcctatgaggatagcgaatgttcctttgagatcgaggtagtcgtccttccgaatgat
tatttcaggctgattaaaattaaaataatagtcaaggacacaaatgacaacgcccccatg
ttcccatccccagttataaacatttccatcccagagaacacgctgattaacagccgcttc
gccattccctctgccactgatccagacatgggttttaacagtgtgcagcactatgagctt
gtgaacgggcagaatgccttcggcttggacattgtggaaacacccgaaggggagaagtgg
ccccagctgattgtggagcagaacttggacagggagcagaaggacacttatgtgatgaaa
ataaaggtagaggacggtggcagccctcaaaagtccagtacggccattctccaggtaacc
gtgacagatgtgaacgacaaccagcccatttttaaggagagtcagatagaggtccatatc
ccagagaattccccagtgggcacctccgtggtacagctgcaagccacggatgcagacatt
gggcccaatgctgacatcagatatgtttatggctcccaggtttccttagccactaaaaca
cttttttcactgaactccaccacaggccttataacagtgcagcggcctttagacagagag
gaaagtgccatccacaagatggtagtgctggcgagtgatggcagttcaaccccagctaga
gctaacattgtcattaatgtgacagatgttaatgataatcctccaaacatagatctgagg
tacatcatcagtccaattaatggcacggttttcctttctgagaaagaccctgttaatacc
aagatcgctctgattacagtgtcagacagagacacagatgtcaacggaaaagtaatttgc
tttattgaaaaggacgtaccctttcaccttaaagcagtttatgacaaccagtatttgtta
gagacctcctcactacttgattatgaaggcaccaaagagtataactttaaaatcgtagca
tccgactctggtaagccaagcttgaatcagacagctttagtgcgagtgaggctggaggat
gagaacgataaccctcccatctttaatcagcctgtaattgaattggctgtcatggaaaac
aataaaaggggcatgttcctcaccaccatcagtgctgtggatgaggacagtggaaagaac
gcagaaattgtttaccagcttggacctaatgcatccttcttcgacctggatcgtaaaact
gggattctcacagcttctcgagtgttcaaccgagaggaccaggagcgttacctcttcaca
gtgacggcaagggacaacgggacacctccgcttcaaagccaggctgccgttatagtcacc
atacaggatgagaatgacaacagtcctaagttcacgcacaaccactttcagttttttgtg
tctgagaacctacctaagtacagcacggttggagtgatcactgtgaccgacgccgatgcc
ggagagaatgccgtcgtgacactctccatactgaatgactatgaaaatttcatcttagat
ccctattctggagttataaagtccaacgtgtccttcgacagagagcagcagagctcctac
acctttgacgtccgggcagttgacagtgggcagccgccttgctcatcatcagccaaggtg
actataaatgttatcgatgtcaacgacaacactcccattgttatttatcctccgtcaaat
acttcattcaagttggtacccctctcttccattcctggatcggtggtggctgaggtcttt
gccgtggatggagacacgggaatgaatgccgagctgaaatacactattgtgagtggcaat
aacaatggcttgttcaggattgaccccgtgacgggcaacattacccttgaggagaagccg
tctgtcgctgacattggcctccatcgcctggtggtcaacataagcgatctgggttaccca
aagtctctatataccctggtcttggtgttcctgtatgtgaatgacaccgtgggcaatgcc
acttacatttatgacctaattcgcagaaccatggagactcccttggataaaaacatcggt
gacagcggcgagacttatccgagtggagactacttgacaattatgattgctattgtggca
ggggccatggtggtaatagtggtgatattcgtcaccatcctgctacgttgtcgccatgtt
tcgaggtttaaggcggctcagaggaaaaagcagggtgccgagtggatgtcccccaatcag
gagaataagcagaataaaaaaaagaagcggaagaaaaggaaatcgccgaaaaactccttg
ctgaactttgtcaccattgaagagaccaaacctgatgaccctatgcacaaacccattaac
ggcactataagtcttccagcggagctggaggagcagggcatagggcgctttgactggagc
tccgcgcccaccagcacctttaaacccagcagccccgacctggccaggcactacaagtcg
gcctctccgcagtccgctttccacctgaaggctgacaccccagtgtctgtgaagaagcat
catgtggttcaggagctccccttggacaacaccttcgtcgggggctgcgacaccctctcg
aagcggtcctccaccagctcagaccacttcagtgcctctgaatgcagctcccagggtggc
ttcaagacaaaggggtccttgcacaccagacagggaactttaactcgagccaggactgaa
ctgaatcctgaatatctggacctccgatcccggactgaactgaaccctgaatattggact
ccttgcacacctttatcgcagcgacgcgtaacgttccacctgcctgacggctcccaggaa
agctgcagtgacagtggtctaggggaccatgagcccgtgggcagtggaactctcctctca
caccctcttcctctggttcagccgcaggaggacttctacgaacaggcctctcctgacaaa
cggactgaagcggatggcaactccgaccccaactctgatggccctctcggaccaagagga
ctggtagaagccacggagatgtgcacccaggagtgcttggtgctgggccactcagacaac
tgctggatgcccccaagccttgggacgtaccaacaacccaagtcccccatttctgccttt
gccaaccaaaaggactgggccaaagacaaactgctgaacgggcacactctgacgcggacc
tggaagagtgagggcagccgggaccagtttgaggatcggaagcaatttggcagcgccgaa
ggacatttcacccaggctggtcacatgacagacattccactggctagcttgaaatcctac
aaacaagctatggggcctgacagtccgaaggagcaccagttataa
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