Scleropages formosus (Asian bonytongue): 108918503
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Entry
108918503 CDS
T04919
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03083
Polycomb repressive complex
sfm04980
Cobalamin transport and metabolism
sfm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108918503
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
108918503
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108918503
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108918503
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfm03036
]
108918503
03029 Mitochondrial biogenesis [BR:
sfm03029
]
108918503
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108918503
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
108918503
HMT complexes
COMPASS/SET1 complex
108918503
MLL-HCF complex
108918503
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108918503
Mitochondrial biogenesis [BR:
sfm03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
108918503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
108918503
NCBI-ProteinID:
XP_018581341
LinkDB
All DBs
Position
22:5549359..5567799
Genome browser
AA seq
2052 aa
AA seq
DB search
MSSPGGTVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKKLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVG
WDIPITYGVLPPPRESHTAVVYTDRESRKSRLIIYGGMSGCRLGDLWTLDIDTLTWNKPT
VSGTAPLPRSLHSATIITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMTW
ETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPPA
PSRVQLVRANTNSLEVSWGSVPTADTYLLQLQKYDIPAATAATSPALNPAPSLPNNSPKS
PAPAAAAPAAQNLPHTGITLVPQSASPTTSGLPVLPTVPGNPLAAATARAPAILKVAAPQ
SSAGASIVTVRQANQAVKSPVTVTSLPAGVRMVVPAQSPQGTVRQMPIGSSSQMSGMAAL
AAAAAATQKIPPSSTATVLNMPAGATIVKTVAVTPGSTTLPTTVKVASPVMVSNPATRML
KTAAAQVGTSVVSTPSTPSRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPITV
GSGGTLISNLGKMMSVVQTKPVQTSAVTGQASTSPVTQIIQTKGPLPAGTILKLVTSADG
KPTTIITTTQAGGTGSKPTILGISSVSPTTTTKPGTTTIIKTIPMSAIMTQPGATGVTSS
PGIKTPITIITTKMMTSGTGTPGKIITAVPKLGTGPGQQGLTQVVLKGAPGQPGTILRTV
PMGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGSVSTANASLATP
ITTLGTIATLSSQVINPAAITVSAAQTSLTTATPLATPTITMQSLNQPTQVTLITTPSGV
EAQSVQELPVSILASPTSEQPTGAVAEGGAGDAPGTVTLVCSNPPCETHETGTTNTATVA
TVNLGGVQRVCSNPPCETHETGTTNTATTASANMGTVQRVCSNPPCETHETGTTNTATTA
SANMGTVQRVCSNPPCETHETGTTNTATVASANMGGVQQVCTSPPSETHDTSTTNTATTA
CSNMGSDQMGTVQSASGSHSPPSSTAALSPSSTSCTTTGASSVPEGHGPQNLRTGTTYTS
TMACSNMGSDQTGTVQSSQSTGASGLISQLEPVCSNPPCETHETGTTNTATQASLSMGFE
QTGAVQRVCSNPPCETHETGTTNTATQASSSMGSEQTGAVQRVCSNPPCETHETGTTNTA
TQASSSMGSEQTGAVQRVCSNPPCETHETGTTNTATQASSSMGSEQTGAIQTMCSNPPCE
THETGTTNTPSTVSSSMGSDQAGTVQRVCSNPPCETHETGTTSTATTATCSMENGEGTAQ
QSGEAAEGDSGVSSTTDVFSTPAHCTGVTVSTTTPSRALTIVTQATPAPGPSVPSITSIT
ESSSVAASEEVPVEITQEQLQQQSEAEAEEMHQVPEEAEPMQTECQAQEGQEARAIPMEE
AEAMVEGDAAQMEQLPIAMETQPSQEDHAEVEGAEAASVAVAATDSEALALPPELMSEGQ
PTTLMVTGLTPEELAVTAAAEAAAQAAASEEAQALAIQAVLQAAQQAVMSAGDGDPGADG
QQTTTIPIVLTQQDLAALVQQQQQLQEAQAAAAVAAAAQQQADTQAAALPTEGLAPADSL
NDPASESNGQHDIAAAVTSAVAGLLPHTSAETLAPSSTFAPSQPVVVASPAKMQAAAALT
EVANGIESVAGKPAAPPAPAKTPVKKENQWFDVGIVKVTNMVVTHYYVPGDDTPATDDDS
GTVPDYSQMKKMELQPGTAYKFRVAGINACGRGAFSEISAFKTCLPGFPGAPCAIKISKS
PDGAHLTWEPPSVTSGKIIEYSVYLAIQSTQSSEPKASSPAQLAFMRVYCGPSPSCLVQT
SSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDGSAGKPGAKRPVSSPDV
KATGPKKARSDQ
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcccggtggcacggttctgcagccgcgctggaagcgggtgttgggctggtcc
ggccccgtcccgcgaccccgacacggccaccgagcggtggcaatcaaagagcttatggtc
gtgttcgggggaggaaatgaaggaattgtggacgagctgcacgtctacaacacggctaca
aaccagtggtttattccagcggtgcgtggtgacatccccccaggctgcgctgcctatggc
tttgtgtgcgatggaacccgtctgcttgtgttcgggggaatggtggaatacggcaaatac
agcaacgacttgtatgagctgcaggccagtaggtgggaatggaaaaagctgaagcccaaa
gctcctaagaatggccccccaccgtgccctcgcctgggtcacagcttctccttggtgggg
aataagtgctacctgtttggaggtctggcaaatgacagcgaggaccccaaaaacaacatt
cctaggtacctgaacgacctgtacaccttggagctacgtgcagggtccagtgttgtcggc
tgggacatccccatcacatacggcgtgctgccgccgccccgtgagagccacactgctgtg
gtctatactgacagggagagcaggaaatcccgactgatcatctatgggggcatgagcggc
tgccgcctgggtgacctctggacactcgacattgacacccttacctggaacaagccaaca
gttagtggcacagcaccgttgcctcgcagcctccattctgccaccatcatcacgaacaag
atgtacgtgtttggagggtgggttcccttggtgatggacgacgtgaaggtggccactcat
gagaaagaatggaagtgcacaaacacactggcctgtctgaacctggactctatgacctgg
gaaacagtgctgatggacaccctggaggacaacatcccgcgagcaagagcagggcattgt
gccgtcgccattaactctcggctctatgtctggagcggccgagacggctaccgcaaggcc
tggaataaccaagtttgctgcaaggacctttggtacttggagacagacaggccccctgct
ccttcacgtgtgcagctggttcgtgccaacacaaactcgctggaggtgagctggggctcc
gtgcccacagctgatacatacttgctgcagctgcagaaatacgacatccctgctgccact
gctgccacgtcaccggcccttaatccggccccctcgctgcctaataactcgcccaagagc
cccgccccagcagcagcggcaccagctgcccagaacctgccgcacacaggcataaccctc
gtacctcagtctgcctcgcccacaacctcagggctgcctgtcctccccactgtgccagga
aaccccttggctgctgccacagcccgggcccctgctatcctgaaggtggccgcacctcag
tccagcgctggcgcctccattgtcacagtgcgacaggcaaatcaggctgtgaagtcccct
gtcacagtcacttcgctcccggcaggtgtccgtatggttgtgcctgcacagagccctcaa
ggaacggtacgacaaatgccgatcggaagcagttcccagatgagtggaatggccgccctc
gctgcagcggccgcagctacgcaaaagatcccaccttcctctacagccacagtgctgaac
atgccagctggggccaccattgtcaaaactgtggctgtaaccccaggctccaccaccctg
cctaccaccgtcaaagtggcctcccctgttatggtgagcaacccggctacccgcatgctg
aagacggcagctgcccaagtgggcacatctgttgtgtccacccccagcacaccatcccgt
cccatcatcactgtgcacaagtctggcaccgtgactgtggcccagcaggcccaggtggtc
accaccgtagtgggtggtgtcaccaagacgatcaccctggtcaagagtcccatcactgtg
gggagcggtggaactctgatctccaaccttgggaaaatgatgtctgtggttcagactaag
ccggtgcagacctctgcagttaccggccaggcgtccactagcccagtaacccagatcata
cagaccaagggtccccttccagcaggcactatcctcaagctagtgacatcagctgatggc
aagcctaccacaatcatcaccaccacccaggctgggggcactggcagcaagcccaccatc
ctggggatcagcagcgtgtcacccaccaccacaacaaaaccaggcactactaccatcatc
aagaccatccccatgtcggccatcatgacccagcctggagcgacaggtgtcaccagcagc
ccaggaatcaagacacccatcacaatcatcaccaccaagatgatgacctctggtacaggc
acccctggcaaaataatcacagctgtgcctaagctgggtacaggacctggacagcagggc
ctcactcaggtggtcctgaagggtgcaccaggacagccaggcactatcctgcgtacagtg
cccatgggtggtgtccgactcgttaccccagtgacagtatctgctgtcaagccaactgta
actaccctggttgttaaagggacaacaggtgtgacaaccctggggacagtaacaggcact
gtgtccaccagcttagcaggggggagcgtcagtaccgctaacgcctccctggctactccc
atcaccacccttggcaccattgccaccctgtccagccaggtgatcaacccagctgccatc
actgtgtctgctgcacagaccagcttgaccacagcaacacctcttgccactcccacaatc
accatgcagtccttaaaccagcccacccaggtgacccttattaccactccgagtggtgtg
gaggcgcagtctgtgcaggagttgcctgtctccatcctggcctcccccacttctgagcag
ccgactggtgctgtggctgagggcggtgcaggggatgcacctggtactgtcactctagtc
tgctctaacccaccctgcgaaacgcatgagacaggaaccaccaacacggccaccgtggca
actgttaacctgggtggagtgcagagggtctgttccaaccccccatgtgagacccatgag
acgggaaccaccaacacagccaccacagcatcagcgaacatgggtaccgtgcagagggtc
tgttccaaccccccatgtgagacccatgagacgggaaccaccaacacggccaccacagca
tcagcgaacatgggtaccgtgcagagggtctgttccaatcccccgtgcgagactcatgaa
acgggaaccaccaacactgccactgttgcctctgccaacatgggtggggtgcagcaggtg
tgcaccagtcccccctcagagacccatgacaccagcactaccaacactgccacaaccgcc
tgctcaaatatgggctccgatcagatgggcacagtccagagtgcctcagggtctcattcc
cctccctcgtccacagctgctctctcgccttcctctaccagctgcacaaccacaggcgca
agctctgttcctgagggtcacggaccccagaacctgcgaaccggcaccacctacacctcc
accatggcctgctccaacatgggctccgaccagacgggcactgtacaaagttcccagtcc
actggtgcttctggcctcatttcacagctggagcctgtttgttccaacccgccctgcgaa
acccatgagacgggcaccaccaacacggcaacgcaagcgtccttaagcatgggcttcgag
cagaccggtgccgtccagagggtgtgctccaacccgccctgtgaaacccatgagacgggc
accaccaacacagcaacgcaagcgtcctcaagcatgggctccgagcagaccggtgccgtc
cagagggtgtgctccaacccgccctgtgaaacccatgagacgggcaccaccaacacagca
acgcaagcgtcctcaagcatgggctccgagcagaccggtgccgtccagagggtgtgctcc
aacccgccctgtgaaacccatgagacgggcaccaccaacacagcaacgcaagcgtcctca
agcatgggctccgagcagactggtgccatccagacgatgtgctccaacccgccctgcgaa
acccacgagacaggcaccaccaacacaccatccacagtctcctccagcatgggctctgac
caagctgggactgtgcaaagggtgtgttccaacccgccctgcgaaacccatgagacaggc
accaccagcacggccaccacggcaacctgcagcatggagaatggtgagggcacagcccag
cagagcggcgaggcagctgaaggagactctggtgtgagcagcaccacagacgtcttttcc
acacccgcccattgcacaggtgtgactgtttccacaacgacaccaagcagggccctcact
attgtgacccaggccacacctgctccaggcccctctgtgccgtccatcacctctatcaca
gagtcatcctcagtggcagcgagtgaggaggtcccggtcgagatcacccaggagcaattg
cagcagcagagtgaagccgaagcagaggagatgcatcaggtccccgaggaggcagagccc
atgcagacagagtgccaagcccaggagggccaggaggctagagcaattcctatggaagaa
gctgaggccatggtagagggggatgctgcacagatggagcagcttcccatcgccatggaa
acgcaaccaagccaggaagaccatgcagaggtggaaggagcggaggctgcttcagtggct
gttgcagccacagactcggaagccctcgctctacctcccgagctgatgtctgaggggcag
cctaccacgctgatggtgacaggactcactccagaggagctggctgtgacagcggctgca
gaagcagcagcgcaagctgctgcctcggaagaggcacaggctctagccatccaggctgtc
ctgcaggctgcacagcaggccgtcatgagtgctggagacggagacccaggtgccgatggt
cagcagaccaccactatccccatagtgctgacccaacaggatctggctgcccttgtccag
cagcagcagcagctgcaagaggcacaggcagcagctgcagttgctgcagctgcacagcag
caagcggatacccaagctgcggccctgcccactgaagggctcgccccagctgacagcctc
aacgaccctgcctccgagagcaacggccagcacgacatagcagccgctgtaactagtgca
gtagctggattgctaccgcacacgtctgcagaaaccttggccccatccagcacttttgct
ccttcacagcctgtggtggttgccagcccggccaagatgcaggcagccgcagccttaacg
gaagtagccaatggcatcgaatctgtggctgggaagccagctgctccccctgcccctgcc
aagacccctgtgaaaaaggagaaccagtggtttgatgtaggaatagtcaaggtgaccaac
atggttgtcacccactactacgttccaggggatgacacgcctgctactgatgatgactcg
gggactgtcccagattacagccaaatgaagaaaatggagctgcagccaggcacggcctac
aagttccgggttgctgggatcaatgcctgtggccgcggggccttttcagaaatctcagcc
ttcaagacttgcctgccaggcttcccaggagcaccctgtgccatcaagatcagcaagagc
cctgatggtgcccacctgacctgggagcctccctccgtgacatcagggaagatcattgag
tactctgtgtacctggctatccagagcacacaaagcagcgagcccaaggcctcgtcccca
gcacagctagccttcatgcgtgtgtactgtgggcccagcccttcatgccttgtgcagact
tccagcctctccaatgcccacattgactacaccaccaagccagctatcatcttccgcatt
gcggcacgcaacgaaaagggttatggtccagccacgcaagtccggtggctgcaagagtct
agtaaagatgggtccgctggaaaacctggggccaaaaggccagtttcatccccagacgtc
aaggccacaggtccaaagaaagcaaggtcggaccagtga
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integrated database retrieval system
