Scleropages formosus (Asian bonytongue): 108918804
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Entry
108918804 CDS
T04919
Symbol
casc3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03013
Nucleocytoplasmic transport
sfm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108918804 (casc3)
03015 mRNA surveillance pathway
108918804 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108918804 (casc3)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108918804 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
108918804
NCBI-ProteinID:
XP_018581880
UniProt:
A0A8C9QW47
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Position
21:12173420..12183465
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AA seq
765 aa
AA seq
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MADRRRRRKRASQDSEEEDESGSGTESGGFTKGRSGGPDPAVSPSVRPRPRSEAESECES
EDDIGEAVLTDYDSADAEENGSHSEGDEEEIGEKEFGDEEESKSQGEAKSEDKACEELLE
QVGPEDDDEDNGGQDREVKAEEKSNLAGERQSGDGQESTDDPENKTGSKASKKLDDDEDR
KNPAYIPRKGLFFEHDVRGQAHEEDIRPKGRHRKLWKDEGRWEHDKFREDEQAPKSREEL
IAMYGYDIRNANGPNDSRLYRSRKPRYGSSPSRDKRWRNGEKPNCTSWSNSGSNSKSLAN
VPHSSSPPSSSVAPPASRCHGGGVRSGSHSQSRSFYSSRPPQASYRGESRANYKGSEENH
SQHARRNYTQHDGHRSSGLRGRGAEAERSPSVVVEEEHYNEDDETLKQQQTTYNSSKASD
RTTAAVPEHSRQREDEPPEAAPPADASPAAPERTVERKSYSLARRTRTKPSELGKQASLD
DPAPQTPFVPQAAPPSVKSDGWEATGDSPAVQGGLSGLDQDLARLSLAGQNWAQSPPSYL
RAEMRGIPNSMHMGSGPPPQYNRIEEMGVGAGRAKRYSSQRQRPVPEPAPMHIGIMEGHY
YEPMSFQGPIYAHSDSPTPLPPQGMLVQPEMHLTHPGHPGHPGLHPHQSGAALPNPAMYA
GPPVSMTPGQPPPQQLLAPPFYPPPGVMAFGNTNFTYPAGATLPPMYPNPQAQAQVYGGV
TYYDTVQQQAQPKPSPPRRSSQPVTIKPPPPEVEKNGKDKDKMSS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcgtaggaagcgcgcgtcccaggacagcgaggaagaggatgag
tccggttcgggtaccgaaagcggaggcttcacgaagggcaggtcgggcggtcccgacccc
gccgtgtcacccagcgtccgcccgcgcccgagaagcgaggccgaatcggagtgtgagagt
gaagatgacataggagaagctgtcctgacagactacgacagcgcagatgcagaagaaaat
gggtcccattccgagggagacgaggaggagataggagagaaagagtttggggatgaagag
gaatccaagtcgcagggtgaagccaaatctgaggacaaggcatgcgaagagctgctggaa
caggtggggcctgaggacgatgacgaggacaacggaggccaagacagagaagtgaaggca
gaagaaaagagcaacttggctggagagagacagagcggggatggacaggaaagcacagat
gaccctgaaaataagacagggagcaaagcaagcaagaagctggatgacgacgaggatcgc
aagaacccagcctacatcccgcggaaagggcttttctttgagcacgatgtgagaggacag
gcccatgaggaggatattcggccgaagggccgacataggaagctgtggaaagacgagggc
cgctgggaacacgataagtttcgagaggatgagcaggcgcccaaatcccgggaggagctc
atcgctatgtatggctatgacatccgcaatgccaatggcccaaacgacagtcgcctctat
cgctcccgcaagcccaggtatggcagctcccccagtcgagacaaacggtggcgcaatgga
gagaagcccaactgcacatcctggtccaacagtggcagcaacagcaaatccctggccaat
gtcccacactcatcctctccaccctcttcctcagtggcaccccccgcctcgcgatgtcat
ggtggtggcgtgagatctggctcacattctcaatcccgcagcttttatagcagtcgccca
cctcaggcttcgtaccgcggtgaaagccgcgcaaattataaaggtagtgaagagaaccac
tcgcagcatgcacgcaggaactacacgcagcatgatgggcatcggagctctgggctgcgt
ggcaggggtgccgaggctgagcgcagcccctcggtggtggtggaagaagagcactacaat
gaggatgacgagacactgaagcagcagcagaccacttacaacagcagtaaggcctccgac
agaactactgctgctgtccctgagcactcccggcagcgggaggacgagcccccggaggca
gcacctcctgctgatgcatctcctgctgcccccgagaggacagtggaaaggaaatcatac
tcgctggcgcgcaggactcgtaccaagccctctgagttgggcaagcaggcttctctagat
gatcctgccccacagaccccatttgtaccccaggcagcaccaccttctgtgaagagtgat
ggctgggaagccactggagacagccctgctgtgcagggagggctctcaggactcgaccag
gacctggccagacttagcctggctggacaaaactgggcccagagccctccctcgtacctg
cgtgctgagatgagggggatccctaactccatgcacatgggcagtggtcctcctccccag
tataaccgcatagaagaaatgggtgttggggccggccgagccaagcggtactcttcccag
agacagaggccagtcccggagccagctcccatgcacatcggcatcatggagggccactac
tatgagcccatgtcttttcaaggaccaatctatgcacacagcgacagccccacacctctg
cccccccaaggcatgctggtccagccagaaatgcacctcactcacccaggtcaccctggg
catccaggtttacaccctcatcagtccggtgctgccctccccaaccctgcaatgtatgca
ggcccccctgtctccatgactcctgggcagccaccaccccagcagctcctggcacctcct
ttctatccacctccaggagtcatggcctttgggaataccaacttcacataccctgctgga
gctaccctgcccccaatgtacccaaacccgcaggcgcaggcccaggtatacgggggagtg
acgtattatgacacggtgcagcagcaggctcagcctaagccttcccctccgcggcgctcc
tcccagccggtcactatcaagccccccccacctgaggttgagaagaacggaaaagacaaa
gacaagatgagctcgtag
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