KEGG   Scleropages formosus (Asian bonytongue): 108918804
Entry
108918804         CDS       T04919                                 
Symbol
casc3
Name
(RefSeq) protein CASC3 isoform X1
  KO
K14323  protein CASC3
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03013  Nucleocytoplasmic transport
sfm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108918804 (casc3)
   03015 mRNA surveillance pathway
    108918804 (casc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfm03019]
    108918804 (casc3)
Messenger RNA biogenesis [BR:sfm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108918804 (casc3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 108918804
NCBI-ProteinID: XP_018581880
UniProt: A0A8C9QW47
LinkDB
Position
21:12173420..12183465
AA seq 765 aa
MADRRRRRKRASQDSEEEDESGSGTESGGFTKGRSGGPDPAVSPSVRPRPRSEAESECES
EDDIGEAVLTDYDSADAEENGSHSEGDEEEIGEKEFGDEEESKSQGEAKSEDKACEELLE
QVGPEDDDEDNGGQDREVKAEEKSNLAGERQSGDGQESTDDPENKTGSKASKKLDDDEDR
KNPAYIPRKGLFFEHDVRGQAHEEDIRPKGRHRKLWKDEGRWEHDKFREDEQAPKSREEL
IAMYGYDIRNANGPNDSRLYRSRKPRYGSSPSRDKRWRNGEKPNCTSWSNSGSNSKSLAN
VPHSSSPPSSSVAPPASRCHGGGVRSGSHSQSRSFYSSRPPQASYRGESRANYKGSEENH
SQHARRNYTQHDGHRSSGLRGRGAEAERSPSVVVEEEHYNEDDETLKQQQTTYNSSKASD
RTTAAVPEHSRQREDEPPEAAPPADASPAAPERTVERKSYSLARRTRTKPSELGKQASLD
DPAPQTPFVPQAAPPSVKSDGWEATGDSPAVQGGLSGLDQDLARLSLAGQNWAQSPPSYL
RAEMRGIPNSMHMGSGPPPQYNRIEEMGVGAGRAKRYSSQRQRPVPEPAPMHIGIMEGHY
YEPMSFQGPIYAHSDSPTPLPPQGMLVQPEMHLTHPGHPGHPGLHPHQSGAALPNPAMYA
GPPVSMTPGQPPPQQLLAPPFYPPPGVMAFGNTNFTYPAGATLPPMYPNPQAQAQVYGGV
TYYDTVQQQAQPKPSPPRRSSQPVTIKPPPPEVEKNGKDKDKMSS
NT seq 2298 nt   +upstreamnt  +downstreamnt
atggcggacaggcggcggcgtaggaagcgcgcgtcccaggacagcgaggaagaggatgag
tccggttcgggtaccgaaagcggaggcttcacgaagggcaggtcgggcggtcccgacccc
gccgtgtcacccagcgtccgcccgcgcccgagaagcgaggccgaatcggagtgtgagagt
gaagatgacataggagaagctgtcctgacagactacgacagcgcagatgcagaagaaaat
gggtcccattccgagggagacgaggaggagataggagagaaagagtttggggatgaagag
gaatccaagtcgcagggtgaagccaaatctgaggacaaggcatgcgaagagctgctggaa
caggtggggcctgaggacgatgacgaggacaacggaggccaagacagagaagtgaaggca
gaagaaaagagcaacttggctggagagagacagagcggggatggacaggaaagcacagat
gaccctgaaaataagacagggagcaaagcaagcaagaagctggatgacgacgaggatcgc
aagaacccagcctacatcccgcggaaagggcttttctttgagcacgatgtgagaggacag
gcccatgaggaggatattcggccgaagggccgacataggaagctgtggaaagacgagggc
cgctgggaacacgataagtttcgagaggatgagcaggcgcccaaatcccgggaggagctc
atcgctatgtatggctatgacatccgcaatgccaatggcccaaacgacagtcgcctctat
cgctcccgcaagcccaggtatggcagctcccccagtcgagacaaacggtggcgcaatgga
gagaagcccaactgcacatcctggtccaacagtggcagcaacagcaaatccctggccaat
gtcccacactcatcctctccaccctcttcctcagtggcaccccccgcctcgcgatgtcat
ggtggtggcgtgagatctggctcacattctcaatcccgcagcttttatagcagtcgccca
cctcaggcttcgtaccgcggtgaaagccgcgcaaattataaaggtagtgaagagaaccac
tcgcagcatgcacgcaggaactacacgcagcatgatgggcatcggagctctgggctgcgt
ggcaggggtgccgaggctgagcgcagcccctcggtggtggtggaagaagagcactacaat
gaggatgacgagacactgaagcagcagcagaccacttacaacagcagtaaggcctccgac
agaactactgctgctgtccctgagcactcccggcagcgggaggacgagcccccggaggca
gcacctcctgctgatgcatctcctgctgcccccgagaggacagtggaaaggaaatcatac
tcgctggcgcgcaggactcgtaccaagccctctgagttgggcaagcaggcttctctagat
gatcctgccccacagaccccatttgtaccccaggcagcaccaccttctgtgaagagtgat
ggctgggaagccactggagacagccctgctgtgcagggagggctctcaggactcgaccag
gacctggccagacttagcctggctggacaaaactgggcccagagccctccctcgtacctg
cgtgctgagatgagggggatccctaactccatgcacatgggcagtggtcctcctccccag
tataaccgcatagaagaaatgggtgttggggccggccgagccaagcggtactcttcccag
agacagaggccagtcccggagccagctcccatgcacatcggcatcatggagggccactac
tatgagcccatgtcttttcaaggaccaatctatgcacacagcgacagccccacacctctg
cccccccaaggcatgctggtccagccagaaatgcacctcactcacccaggtcaccctggg
catccaggtttacaccctcatcagtccggtgctgccctccccaaccctgcaatgtatgca
ggcccccctgtctccatgactcctgggcagccaccaccccagcagctcctggcacctcct
ttctatccacctccaggagtcatggcctttgggaataccaacttcacataccctgctgga
gctaccctgcccccaatgtacccaaacccgcaggcgcaggcccaggtatacgggggagtg
acgtattatgacacggtgcagcagcaggctcagcctaagccttcccctccgcggcgctcc
tcccagccggtcactatcaagccccccccacctgaggttgagaagaacggaaaagacaaa
gacaagatgagctcgtag

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