Scleropages formosus (Asian bonytongue): 108918916
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Entry
108918916 CDS
T04919
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108918916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108918916
03110 Chaperones and folding catalysts [BR:
sfm03110
]
108918916
03029 Mitochondrial biogenesis [BR:
sfm03029
]
108918916
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108918916
Enzymes [BR:
sfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108918916
Messenger RNA biogenesis [BR:
sfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108918916
Chaperones and folding catalysts [BR:
sfm03110
]
Heat shock proteins
HSP60 / Chaperonin
108918916
Mitochondrial biogenesis [BR:
sfm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108918916
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108918916
Exosomal proteins of other body fluids (saliva and urine)
108918916
Exosomal proteins of breast cancer cells
108918916
Exosomal proteins of colorectal cancer cells
108918916
Exosomal proteins of bladder cancer cells
108918916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AcnX_swivel_put
POR
EAD9
Motif
Other DBs
NCBI-GeneID:
108918916
NCBI-ProteinID:
XP_018582060
LinkDB
All DBs
Position
24:12368599..12376847
Genome browser
AA seq
597 aa
AA seq
DB search
MFRGPWTSTRINDTACAVVPATWLSHRLLKMLLLPIALSRLRPICRALSPRLARTYAKDV
KFGPDARALMLQGVDLLADAVAVTMGPKGRTVVIEQSWGSPKVTKDGVTVAKSIELKDRC
KNIGARLVQDVANNTNEEAGDGTTAATVLARAIAKEGFEVISKGANPIEIRRGVIMAVDR
VISELKKLSKPVTTPEEIAQVATISANGDGEIGAIISNAMKKVGRRGVITVKDGKTLHDE
LEVIEGMKFDRGYISPYFINTSKGQKCEFQDAYLLLSEKKISSVQSIVPALELANQHCKP
LVIVAEDVDGEALSALVLNRLKVGLQVVAVKAPGFGDNRKNQLQDMAVATGGIVFGDEAM
GLALEDIQAHDFGKVGEVVVTKDDTLLLKGRGDPATIEKQVAAIAEQLETTNSDYEKEKL
NERLAKLSDGVAVLKVGGASEVEVNEKKDRVTDALNATRAAVEEGIVPGGGCALLRCIPA
LDAIKPANSDQKIGVDIIRRALRIPAMTIARNAGVEGSLVVEKILQSGPEVGYDALNGEY
VNMVEKGIIDPTKVVRTALMDAAGVASLLSTAEAVITELPKEEKEGGMPGGMGGGMF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgttccggggcccgtggacaagtacccgcataaacgataccgcgtgcgccgtggtgccc
gccacgtggttgagccaccgcctactgaagatgctgctcttacctattgccttgagtcgg
ctgcggcccatttgcagggccctttccccacgcctcgctcgcacgtatgcaaaagatgtc
aagtttggaccagatgcccgtgccctcatgttgcagggagtggatctgctcgctgatgcg
gttgcagtgaccatgggacccaaggggcgcacagtcgtcattgagcagagttggggcagc
cccaaggttacgaaggatggtgtgacagtggccaaaagcattgagctgaaggacaggtgc
aagaacatcggagcccgactcgtgcaggatgtggccaacaacactaacgaggaagccgga
gatggaaccacggctgctaccgtgctagcacgcgctatcgccaaggagggatttgaagtt
atcagcaagggcgccaaccccatagagatccgtcgtggtgtcataatggctgtagacaga
gtcatcagtgaacttaagaagctgtctaagcctgttactacacctgaagagatagcacag
gtagcaacaatttctgcaaatggagatggcgagattggtgccattatttcaaatgccatg
aagaaagtgggccgcaggggggttatcaccgtcaaggatggaaaaactttgcatgatgag
ctggaggttattgaggggatgaaatttgaccgtggctacatctccccatacttcatcaac
acctccaaaggtcagaagtgtgagttccaggatgcctacctcctcttgagtgagaagaag
atctctagtgttcagagcattgtcccagctctggagcttgccaaccagcattgcaagccc
ctggtcatagtggctgaggatgttgatggcgaggccttaagcgcccttgtcctgaacagg
ttgaaagttggtctgcaggttgtagctgtgaaagctccaggatttggggacaacaggaag
aaccagctgcaggacatggctgttgctactgggggcattgtgtttggtgatgaagcgatg
ggtctggccctggaggacatccaggcgcatgactttggtaaagtgggcgaagtggtcgtg
acaaaggatgacaccttgcttctgaaggggcgtggtgacccagccaccattgagaagcag
gtggcagcaattgctgaacagctggagaccaccaacagtgactatgagaaagagaagctg
aatgagcgcctggccaagctgtcagatggtgtggctgtgctcaaggttggaggcgctagt
gaggtggaggtgaatgaaaagaaggaccgtgtgacagatgctctgaatgccacacgggcc
gcggtggaggaaggcattgtccctgggggtggctgtgccctcttgcgttgcattcctgct
cttgatgccattaagccggccaactctgaccaaaagattggtgtggacatcatccgtagg
gccctgcgcatccctgccatgacaattgccaggaatgcaggggtggagggttcgctggta
gtggagaagatcttacagagtgggccagaagtgggttatgatgctctgaatggggaatat
gttaacatggtggagaaaggcatcattgaccctaccaaggttgtcaggacagccctgatg
gatgcagctggtgttgcatccctcctatccactgcagaggcggtcatcacagagctgccc
aaggaggagaaggaaggaggcatgccaggtggcatgggtggaggcatgttctaa
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