Scleropages formosus (Asian bonytongue): 108919055
Help
Entry
108919055 CDS
T04919
Symbol
cacna1e
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X2
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108919055 (cacna1e)
04020 Calcium signaling pathway
108919055 (cacna1e)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108919055 (cacna1e)
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108919055 (cacna1e)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
108919055
NCBI-ProteinID:
XP_018582301
LinkDB
All DBs
Position
9:9198107..9308520
Genome browser
AA seq
2260 aa
AA seq
DB search
MARFGDDVPGLLGAADGGSERSRSRDGAPVSTGGVSPAFKQTKAQRARTMALYNPIPVRH
NCFTVNRSLFIFGEDNVVRKYAKKIIEWPPFEYMILATIIANCIVLALEQHLPEDDKTPM
SKRLEKTEHYFVGIFCFEAGIKIVALGFVFHKGSYLRNGWNVMDFIVVVSGILATASYEL
NISLDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGKLHLTCAPLPNISENNTLDPSEYKFPCGNRKCPEQYNCSSVWIGPNDGITQFDNI
LFAVLTVFQCITMEGWTPVLYNTNDALGPSWNWLYFIPLIIIGSFFVLNLVLGVLSGEFA
KERERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGTSALDVLKRATI
KRGRMDAVRHRPGEDQYADISSVGIPMTRASIRSTRRGPTAYLRRKERMLRISIRRMVKT
HTFYWTVLGLVALNTLCVAIVHHNQPQWLSTLLYYAEFIFLGLFLLEMLLKMYGLGPRLY
FHSSFNCFDCGVIVGSIFEVMWGVFRPGMSFGISVLRALRLLRIFKITKYWASLRNLVVS
LMNSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIFDEYTPTHFDTFPAAIMTVFQILTG
EDWNEVMYNGIRSQGGVSKGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEEEEAFNQKHALQKAKEVGHMSSLISSERRRRPYLYRKRAIHRSRPAYIMEAAVESLSR
EPHSRAFNASNSFMSRRERRRRMTMSVWEQRTSQLRRHRQMSSREVLYSNPKEDLDSSLS
CHHHHKPTQTDSLRCLAEPPGPMAATLPEPPLPIDMPLAENRTSTPMLLPEPPVDTSMPL
SETPEPERLSLPEAKPGNHRHSALDGPRSPRLNGDRRQRVARKVRPPPGDTLAPDTGIRP
RRYRHREPQSETEGLSPHSESSRSISRERGIPGDAEEKESKSGNQGESSQPEKVEAKHRL
NGTEFPGCPEPLDSKPVVDSPPEQDKELAEPIAVHPTTLQPLKDPTSEVPNVTGGKADSQ
DHPASLNQEKSPLNPSIVIEVTDVQSSMELTPITANSKDVEASKTEKEEEDGPKQPTAAP
PNSMFIFKPDNAIRKACHYVVNLRYFELCILLVIAASSIALAAEDPVSTNSEWNKVLRYF
DYVFTGVFTFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALIAFALTNVMGNNKGR
DIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYKLFMFIFAVIAVQ
LFKGKFFYCTDGSKDTQKECQGFYIDHEKDKKEVKKREWKRHDFHYDNIIWALLTLFTVS
TGEGWPQVLQHSVDVTEEDRGPSRGNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQ
GDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRQTFQYRLWHFVVSPSFEYTVLAMIA
LNTVVLMMKYYSAPATYDTVLKHLNTAFTVLFSLECVLKILAFGFINYFRDTWNIFDFIT
VLGSITEIVVDRLSLKMFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCL
LIAMLFFIYAIIGMQVFGNIKLSHTSHINQHNNFKTFFGALMLLFRSATGESWQEIMLSC
LGGQDCEPDPSIEQSPDSNEDCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRD
SSILGPHHLDEFVRIWGEYDRAACGRLHYKDMYKVVRTISPPLGFGKNCPYRVACKRLVL
MNMPVDEEMSVHFTSTLMALIRTALEIKIARGGEDRGQMDIELQKEISVIWPHLSQKTLD
LLVPINKASDMTVGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQDIL
TNAKALPFLSPSAGSALTRGAFMALSPISPQDMFVQPDRTPDMEEKDDFHCHHHRLHHHY
LMTNSSSMKRSFSTIGDQCANGLWQDEFSLERVSPDRLYRPRQRNYTGADLQDHGDRERG
RSKERRHLLSPDVSRCNSEERSRHQSRERRQSRSPSEGRAPTSHIQANSSDSPVPSISES
GTPRSRRQLPQTPTRPRPHISYSPLVCRAHPTTPSDNGGSPRTQDGRESDFSSWEVRGAA
SAGGHGNRGSQHSTPQHYISEPYLPFHEEFHSPDSGGQEETLTFEVAVATSLGRSTVTNS
APPFRHAWQVHNGHFRKHLGQSGSAVGREFISDSDEDDRC
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttcggggacgacgttcccggcttgctgggagccgcggacgggggttcggag
cgcagccggagccgcgatggagcgccggtgtccacaggtggggtgtcgcccgccttcaag
cagacgaaagcgcagagagcgcgcaccatggcgctctacaacccgatccccgtgcgccac
aactgcttcaccgtcaaccgatcgctcttcatcttcggagaggacaacgtggtgcgcaaa
tacgccaagaagatcatagagtggcctccgtttgagtacatgatcctggccaccatcata
gccaactgcatcgttttggctctggagcagcatctgcctgaagacgacaagacccccatg
tccaagagactggaaaagacagagcattacttcgttgggatattttgcttcgaagcagga
attaaaatcgtggctttggggttcgtgttccacaaaggctcatacttgaggaacggctgg
aacgtcatggacttcatagtggtggtcagcggaattctggccacggcaagctatgaattg
aatatctctttggacctgcggaccctgagggcagtgcgagtgttgagacccctcaaactt
gtatcggggatccccagcctgcagatcgtccttaagtccatcatgaaagccatggtgccc
ctgctgcagattgggctgctgctcttctttgccatcctcatgttcgccatcattggcctc
gagttctacagcggcaagctgcacctcacctgtgcgcccctgcccaacatcagcgaaaat
aatactctggatccgtcagagtacaaatttccctgtgggaacaggaaatgtcctgagcag
tacaactgcagcagtgtctggattgggcccaatgacgggattacgcagtttgacaacatc
ctctttgccgtcttgacggtcttccagtgcatcaccatggagggttggacccccgtgctc
tacaataccaatgatgccttaggcccttcatggaactggctgtactttatccccctgata
ataataggatccttttttgtgctgaacctggtgttgggagttctctcaggggagtttgcc
aaggagagggagcgagtggagaaccgcagggcttttatgaagctccgcaggcaacagcag
atcgagagggagctcaacggctaccgtgcttggattgaccgtgcagaggaggtgatgctg
gcagaagagaataagaattctggaacttcagctttagacgttttgaaaagggccaccatc
aaaaggggccgcatggatgctgtccgacacagaccgggagaggaccaatacgccgacatt
tcttccgtgggcattccgatgacgagggccagcattaggagcacccgccgggggcccact
gcctacctgcggcgcaaggagcgcatgcttcgcatctccatccgacgcatggtgaagacg
cacaccttctactggaccgtgctgggcctcgtagccctcaacacactctgtgtggccatc
gtgcaccacaaccagccccagtggctctcaacgctcctctactatgcagaattcattttc
ttgggtctgttcctcttggaaatgctgttgaaaatgtacggcctgggacccagactttac
ttccactcctccttcaactgctttgactgtggggtgattgtaggcagcatctttgaggtg
atgtggggagtcttccgacccggaatgtcctttgggatcagtgtgctgcgggcactccgt
ctgctccgaattttcaagatcaccaagtactgggcttccctgcggaacttagtggtgtcc
ctcatgaactccatgaagtccatcatcagcttgctgttcctgctcttcctatttatcgtg
gtcttcgctctgctgggcatgcagctcttcggtggcaggttcatcttcgatgaatacaca
cctactcattttgatacctttccagctgccatcatgaccgtttttcagatactgactggt
gaggactggaatgaggtgatgtacaatggaatccgctcccagggcggagtgagcaaaggc
atgtggtcctccatatactttattgtgctcacactgtttgggaactatactctactcaat
gtgttcttggccatcgccgtggacaacttagccaatgcccaggaactcaccaaggatgaa
gaggaagaagaagaggctttcaaccagaaacatgccttgcagaaggccaaggaggttggc
cacatgtcctctctcatatcttcagagaggagaaggaggccctatctgtacagaaaacga
gccatacacaggagcaggcctgcctacattatggaggctgcagtggagagcctgtcacgg
gagccacacagcagggcattcaatgcctctaactctttcatgtccaggagggagaggaga
agacgaatgaccatgtccgtgtgggagcagaggaccagccagctgcgtaggcaccggcag
atgtcgagccgcgaggttctctacagcaaccccaaggaggatctagattcatccctcagc
tgccaccatcaccacaagcctacacagacagatagcctgcggtgcttggctgagccccct
gggcccatggccgcgacgcttccggaacctccactgccgattgacatgcctctggccgag
aaccgcacctccacgcccatgctccttccagaaccccctgtggacacgagcatgccccta
tctgaaacaccagagccagaaagactatctctaccagaggccaaaccgggaaatcaccgc
cactcagcactggatggcccaaggagcccccggctgaatggggataggaggcagcgagtg
gcacgcaaggtccggccacctccaggagacaccctggcacctgacaccggcatccggcca
aggaggtatcgccaccgtgagccccagtctgagacagaaggactctccccacacagcgag
agcagccgttctatcagtcgggagaggggcatccctggtgacgcagaggaaaaagagagc
aaatctggcaaccagggggaaagcagccaaccagagaaagtcgaggcgaaacacaggttg
aatggcactgagttcccaggttgtcccgaacctctcgactccaagcccgtggtagactct
cccccagagcaggacaaggagctggcagagcccatagctgtgcacccaactactcttcag
cccctaaaggaccccacatcagaggttcccaacgtgacaggaggcaaagctgattcccag
gatcatcctgcatccttgaaccaggagaagtctcccctaaaccccagcatagtgattgag
gtgacggatgtgcagtcatccatggaactgactccaatcacagcaaacagtaaggatgtg
gaagccagcaagactgagaaagaggaagaggatggccctaagcagcccacagcagctcca
ccaaacagcatgtttatcttcaaacccgacaatgccattcgaaaggcatgccattatgta
gtgaacctacgatactttgaattgtgcatcctcctggtgattgctgccagcagcatagcc
ctagcagcagaggatcctgtgtccaccaactctgagtggaataaggtcttgcgttacttt
gattatgtattcaccggagtattcacctttgagatgattattaagatgattgaccaaggt
ctgatattgcatgacgggtcatacttccgtgatctgtggaatattctggacttcattgtg
gtggtgggagctcttattgcctttgccctcacgaatgtcatgggaaataacaaaggccgt
gatataaagaccatcaagtccctccgtgttctccgggtcctgcgtcctctgaaaaccatc
aagagacttccgaagctaaaggctgtatttgactgcgtggtgaactccctgaagaatgtc
ttcaacattctcattgtctacaagctcttcatgttcatctttgctgtcattgctgtgcag
ctgtttaagggaaagttcttctactgcactgatggatctaaggacacacagaaggagtgc
cagggcttctatattgaccatgagaaggacaagaaggaggtgaagaagagagagtggaag
aggcacgactttcactatgacaacattatctgggccttgctcaccctgtttacggtgtca
acgggagagggctggccacaagttctgcagcactccgtggatgtgacggaggaggacagg
gggcctagccgtgggaaccgtatggagatgtccatcttctatgtggtctactttgtggtt
ttcccattcttctttgtcaacatctttgtggccctcatcatcatcaccttccaggagcaa
ggagataagatgatggaagagtgcagtttggagaagaatgagagggcttgtatagacttt
gccatcagcgccaagcccttgactcgctacatgccccagaacaggcaaacgttccagtac
aggctgtggcactttgtggtctctccatcatttgagtacaccgtgttggccatgattgct
ctcaacactgtagtcttgatgatgaagtactactctgcacctgcaacttatgacacagtc
ttgaagcacttgaacacagccttcaccgtgctcttttccctcgagtgtgtcctgaagatc
ttggcctttggtttcataaattacttccgagacacttggaatatatttgactttattact
gtcctaggcagcattacagaaatagtggttgaccgtttgtcattgaaaatgttcaacatg
agcttcctgaagctcttccgggctgctcgactgatcaaactgctgaggcagggctacacc
atccgcatcctgctgtggacttttgtccagtccttcaaggcattgccttatgtgtgtcta
ctcattgccatgctgttctttatatatgcaattattgggatgcaggtgtttggaaacatc
aaactgagtcatacaagccacatcaaccagcacaacaacttcaaaactttcttcggtgcc
ctcatgctcctgttcaggagtgccactggtgagtcctggcaggaaatcatgctatcttgc
ctcgggggtcaagactgtgagccagacccctccattgaacaatctccggattctaatgaa
gactgcggcaccgactttgcctacttttattttgtctcctttatatttttcagctctttt
ctgatgctgaacctctttgtggccgtgatcatggacaactttgaatacctgacccgagac
tcctctatcctgggtccgcaccacctggatgagtttgtgcggatttggggggaatatgac
cgtgcagcatgtggaaggcttcattataaggacatgtacaaagtagtgcgaacgatttcc
cctcctctgggctttggaaagaactgcccttacagggtggcgtgcaagcgattggtgctc
atgaacatgcctgtggatgaggagatgtctgtccatttcacttccaccctgatggctctg
attcggacagccttggagatcaaaatagccagaggtggtgaggaccgaggccaaatggac
attgagctacagaaagagatcagtgttatttggccacatctttcccagaaaactctggac
ctccttgttcccataaataaagccagtgacatgacagttgggaagatctatgccgccatg
atgatcatggactactacaagcaaagcaaagccaagaagttaaggcaacagctggaggaa
cagaaacatgctccaatgttccagcggatggatgcatcctcactccctcaggatatcctg
accaatgccaaagccctgcctttcttgtcccccagtgctggatcagccctaacaagggga
gcatttatggccctcagtccaatctccccccaggatatgtttgtgcagcctgacaggacg
cctgacatggaggaaaaggatgacttccactgccaccatcaccgtcttcatcaccactac
ctgatgaccaacagcagctctatgaaacgttccttttctactattggtgaccagtgtgcc
aacggactctggcaggacgagttctcccttgaacgagtcagtcctgacagactgtataga
ccacgacaaaggaactacacaggggctgacctccaggatcatggagacagggagcgagga
cgctccaaggagcgacgacaccttctctctccagatgtgtcacgttgcaactcagaggag
aggagccggcaccaatcgagggaacgcagacagtctcggtcgcccagtgagggacgggct
cctacctcacacatacaggcaaatagctcagacagcccagtgccatccatctcagagtcc
ggtacaccccgcagcagacgtcagctgccccaaacacccactcgtcctcgcccccacatc
tcctactcccctctggtgtgccgtgcccaccccaccacgccatcggacaatgggggcagt
ccacggactcaggacggcagggaaagtgatttctcctcctgggaggtcaggggtgcagcg
tctgctggaggccatggaaacagggggagtcagcactccactcctcagcactacatctct
gagccctaccttcccttccatgaggagttccacagcccagactctggtgggcaggaggag
actctcacttttgaggtggcagtggcaacaagtctgggacgttctaccgtcacaaactcg
gcaccaccattccgacacgcctggcaggtgcacaatggccacttccgaaaacatcttgga
cagtccggttcagcagtcggccgcgagttcatcagtgacagtgatgaggatgaccgctgc
tag
DBGET
integrated database retrieval system
