Scleropages formosus (Asian bonytongue): 108919082
Help
Entry
108919082 CDS
T04919
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfm03016
]
108919082 (trmt13)
Enzymes [BR:
sfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
108919082 (trmt13)
Transfer RNA biogenesis [BR:
sfm03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108919082 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
108919082
NCBI-ProteinID:
XP_018582359
UniProt:
A0A8D0CBT9
LinkDB
All DBs
Position
9:complement(8893905..8898603)
Genome browser
AA seq
458 aa
AA seq
DB search
MEELPADGVSAPLPGRCRFYVAKKKRFCKMIVGRGKTLCGEHADGGQEGERRRIPCPLDP
KHTVFEDSLAKHLKKCNSREKPKPVYYVQDINAGPQENEEPLVNEVPIADHSKVQLDLLI
QRLKKAVDGITSKYEERILSHPALNDALSDPKNGDSAFKHLKQQASLLGNMNTLGLLGAD
RCFIEFGAGKGKLSHWMHVAMQECHNVHFLLVERSSTRFKVDGKHRSADSIFERLQVDIQ
HLSLRRVPFLREKKLPIVGVGKHLCGAATDLALRCLLESSGKETSEGPDQPPKKRARQDC
EAEAPPTALGTADVEWEPVVSGLAVALCCHHRCEWRHYVGKEFFQERGLGAVEFAAYQRM
SSWATCGLRRANNSKGHYPEEETEECEKEEAIVPNSLEEGVSAEEREHVGRLCKVLIDYG
RVHFLRRHGFTSHLHHYTSRDVSLENVLLTAVPTTAAS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgccggcggacggcgtgtctgctcctctaccgggaagatgtcgcttttat
gtcgcaaagaagaagcgtttctgcaaaatgatagtggggcgcgggaagacgctttgtggg
gaacacgcagacgggggccaagaaggtgagagaagaagaatcccttgcccgctggatcct
aaacatacagtgtttgaagacagtttggcaaaacatctgaagaagtgcaattctagggag
aagccaaagcctgtgtattatgttcaagatatcaatgccggaccgcaagagaatgaggaa
cctctcgtaaatgaggttcccatagctgatcattccaaggtacagttggatttgttgatt
caaagactaaagaaggcagttgatgggattacttctaaatatgaagaaagaatattatcc
caccctgctcttaatgatgctcttagtgacccaaaaaatggtgactctgcattcaaacat
ttaaagcagcaagcctcccttctggggaacatgaacaccttgggcctgctgggggcagac
aggtgttttatcgagtttggtgcagggaaaggaaagctgtcccactggatgcatgttgcc
atgcaagagtgtcacaatgtccacttcctgctcgtggaaagatcaagcacccgctttaag
gtagatggtaaacacagaagtgcagactccatatttgaaagattacaagtagacattcag
catcttagcctgcgtagagtcccctttctcagagaaaagaagcttccaattgttggagtg
ggcaagcatctgtgtggggcagctacagatctggctctcaggtgtctgctggagagttct
gggaaggaaacaagtgaagggcccgaccagccccccaaaaaacgcgccagacaggactgc
gaagccgaggccccacccacggcactggggacagcagatgtcgagtgggagccagtggtc
tctgggctggccgttgccctgtgctgtcaccaccgctgcgaatggaggcattatgtggga
aaggagtttttccaggagcggggactgggtgctgtagagtttgctgcctaccagcgtatg
tccagctgggctacttgtggtctcaggagagctaacaacagcaagggccactacccagaa
gaggagactgaagagtgtgaaaaagaggaggcaatcgtaccgaatagcttggaggaaggt
gtgtcagctgaggagcgtgagcacgtgggacgcctgtgcaaagttcttatcgactatggg
agggttcatttcttgcgccgccatggcttcacctcccacctgcatcactacaccagcaga
gacgtgtctttggagaatgtgcttctcactgctgtacccaccacagctgctagctga
DBGET
integrated database retrieval system
