Scleropages formosus (Asian bonytongue): 108919227
Help
Entry
108919227 CDS
T04919
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108919227 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108919227 (cnot10)
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108919227 (cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_12
ANAPC3
ARM_TT21_N
TPR_8
ARM_TT21
TPR_7
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
108919227
NCBI-ProteinID:
XP_029103873
UniProt:
A0A0P7TKM8
LinkDB
All DBs
Position
23:complement(17097997..17110301)
Genome browser
AA seq
733 aa
AA seq
DB search
MADNNSIDQGAEMKHDSTSGITDQEKELASNAYDAFTTGNYDESLKHLSSLQELNKEDYK
ISMNKAVAEFYKSGQMTTDCLKQALTAMKHQIHTSVDEMDGLDDVENSILYYNQAIIHYY
MRQYTEAILIGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLEKLAVQG
NNKNGKTEAAGNTNKDVSNQKTEYIAMVEAAKSKIHQYKVRAYIQMKSLKACKREIKSVM
NTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPMKTGECVRCMFWNNLGCIH
FAMGKHNLGLFYFKKALQENENTCAQIGDSSNRHSKRFSGIPMCALLANKRYELLYNCGI
QLLHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCISANKGNSEQETRGIPSKKGIVQS
VVGQGYHRKIILASQSAQNTVYSDGQTAAIPVASMEFAAICLRNALLLLPEHQQQEPKAE
NGSKNSSQSGSTESGSENSESCSGKGQDGDKFVPAPPSSPLKKQELENLRCSILACSAYV
SLALGDNVLALSHAEKLLQQPKLSGSLKFLGHLYAAEALISMDRISDAITHLNPENVTDV
FLGVSSSEQDQGSDRGDVEQTESSGKQTPLCYPSTLNSARAMMLFNLGSAYCLRSEYDKA
RKCLHQAASMVHAKEIPPEAILLAVYLELQNGNTELALQIIKRNQLLPSVKAPSPPDGRK
KTAPLPFTQVQRK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacaacagcatcgatcaaggggcggagatgaagcacgacagcacatcgggg
atcacagatcaggaaaaggagctggcgtccaatgcatatgacgcctttacgacaggaaat
tacgacgaatcactgaagcacctttctagcctgcaggagctgaacaaggaagactacaaa
atatccatgaataaagctgtagctgaattttacaaaagtgggcaaatgaccacagactgc
ctaaaacaagcacttacagcaatgaaacatcagattcatacttctgtggatgaaatggat
ggtttggatgatgttgaaaacagcatcctctactacaatcaagcaatcatacactactac
atgcggcagtacactgaggccatattgataggagagaagctctaccagttcattgaacct
tttgaagagaagtttgctcaggcagtctgcttcctgctggtggacttgtacctcctcacg
ttccagccggagaaggccctccacctgctggcagtgctggagaagctggctgttcaaggg
aacaataagaacggcaaaacagaggctgcaggcaacaccaacaaagatgtcagtaatcag
aagacagagtacattgctatggtggaggctgccaagtcaaaaatccaccagtataaagta
cgggcttacatacaaatgaagtccctgaaggcgtgcaaaagggagatcaagtctgtgatg
aacactgctggaaactctgccccctctctcttcctcaagagcaattttgagtatctgaga
ggaaactaccggaaggctgtgaaactgttaaacagttcaaacatcgcagagcaccctggg
cccatgaaaacaggggagtgtgtgcgctgtatgttttggaacaacctgggctgtatacat
tttgctatggggaagcacaacctggggctgttctatttcaagaaagccctgcaggagaac
gaaaacacatgtgcgcagataggcgacagcagcaacaggcactccaagcgtttctccggc
atccccatgtgtgccttactagccaacaagcgctatgaactgctttacaactgtggcatt
cagctactgcatatagggcgccccctagcggctttcgagtgcctcatggaagcagtccag
gtgtaccattcaaacccgcggctctggctgaggctggctgagtgctgcatctctgccaac
aaggggaactcagagcaggagaccaggggcatccccagtaagaagggtatcgtccagtca
gttgtgggccaaggctaccatcgtaagatcatcctcgcatcgcaatctgcacagaacaca
gtgtacagtgacggacagacggcagccatcccagtcgccagtatggagtttgcagccatc
tgcctgaggaacgccctcctcctccttccagagcaccagcagcaggagcccaaggcagag
aatggctccaagaactcgagccagtcggggagcacagagagcggcagcgagaacagcgag
agctgcagtggtaaaggacaggatggagacaagtttgtccctgcacccccctcctcaccc
ttaaagaaacaggaactggagaacctgaggtgctccatcctggcctgcagtgcctatgtt
tctctggcccttggagacaatgtccttgccttgagccacgccgagaagctcctccaacag
cctaagctgtctggctccctgaagttcttgggccacctatatgcagcagaggccctcatc
tcaatggaccgcatttctgatgccattactcacctgaaccctgagaatgtcactgatgtg
ttcctaggggtctcctcaagtgagcaggaccaaggttcagaccggggggatgtggagcag
acggagtcttcggggaaacagactcctctctgctatcccagcacactaaactctgcacgg
gccatgatgctcttcaacttgggcagcgcgtactgcctcaggagcgagtacgacaaggcc
cgcaaatgcctgcaccaggcagcatccatggttcatgcgaaggagattcctccagaagcc
atcctgctggctgtctacctggagctgcagaatggcaacacagaactggccttgcagatc
attaagaggaaccagctcctcccatcagtcaaggcaccatcacctcctgatgggcgcaag
aagacagcccccctccccttcacacaggtccagcgtaaatga
DBGET
integrated database retrieval system
