Scleropages formosus (Asian bonytongue): 108919271
Help
Entry
108919271 CDS
T04919
Symbol
tdp2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108919271 (tdp2)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108919271 (tdp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
UBA_4
UBA_8
Exo_endo_phos2
Zot
TAP_C
Motif
Other DBs
NCBI-GeneID:
108919271
NCBI-ProteinID:
XP_018582655
UniProt:
A0A8C9R6L9
LinkDB
All DBs
Position
23:16092260..16097191
Genome browser
AA seq
367 aa
AA seq
DB search
MDGGPESDAGLEALRSSLCDEFSAVSGAERGVSQHYLSRNDWHMERALNSFFDEDMKAAF
DEAQSSPERPVSPTAESKGLQSVECIDLTGDDAVCSSTTADVVDSAAQRDSTAQEDCKLS
LITWNVDGLDTDNLAERARGLCSYLVLYTPDVVFLQELIPPYVKYLKKRAVSYIIIEGNE
DGYFTGIMLKKSRVKLLKSEIVPFPTTQMLRNLLVAEVKFLDWDVCLMTSHLESCKEQAQ
ERMNQLSEVFKRMKEAPDNVTILFGGDTNLRDPEVSKVGGLPDGACDVWEHLGKQEHCRY
TWDTKANSNKCVPYVSRCRFDRVYLRPARQGPRVVAEHMTLIGMEKLDCGRYTSDHWGIY
CTFTTGS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggacggggggccggagtcagacgccgggctggaggcgctcaggagcagcctgtgtgac
gagttctcggccgtcagcggcgcggagcgcggggtatcgcagcactacctgtcgcgcaac
gactggcacatggagagagccttgaactcgtttttcgacgaagatatgaaggccgctttc
gacgaagctcaaagttcaccggagaggccggtcagtcctacagctgaaagcaaaggcctt
cagtccgtcgaatgcatagacttgacaggggatgatgcggtttgttcaagcacgactgct
gatgtggtggacagtgctgcgcagcgcgactcgacagcgcaagaggattgcaagctgtcc
ctcatcacctggaatgtagacggcctggatacggacaacctggcagagcgtgccagaggc
ctctgctcatacttagtcctgtacacaccggacgttgtgtttttgcaggaactcattcca
ccctacgttaaatatttgaagaaacgtgctgttagctatattatcattgaaggaaatgaa
gatggttacttcactggcataatgctgaagaagtctcgagtcaaacttctgaaaagtgag
attgtcccttttccaacaacgcagatgctgaggaatctactagtagcggaggtgaagttc
ttggactgggatgtttgcctgatgacctcccacttggagagctgtaaagagcaggcccag
gagcgaatgaatcagctgagtgaggtgttcaagaggatgaaggaggcccctgataatgtc
actattctgtttgggggagacaccaacctgagggaccctgaggtttccaaggtggggggt
ctgccagatggagcatgtgatgtgtgggagcacctgggcaagcaggagcactgccgctac
acctgggacaccaaggcaaacagcaacaagtgtgtgccgtacgtgagcaggtgtcgcttc
gaccgtgtttacctgcgcccggccaggcaaggacctcgggtggtcgcggagcacatgacc
ctgatcggaatggagaagctagactgcggcagatataccagtgaccactggggcatctac
tgcacgttcaccacaggctcctga
DBGET
integrated database retrieval system