Scleropages formosus (Asian bonytongue): 108919292
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Entry
108919292 CDS
T04919
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108919292 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108919292 (ctdp1)
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108919292 (ctdp1)
Protein phosphatases and associated proteins [BR:
sfm01009
]
HAD phosphatases
Fcp/Scp phosphatases
108919292 (ctdp1)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108919292 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
Biotin_lipoyl
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
108919292
NCBI-ProteinID:
XP_018582684
UniProt:
A0A8C9VMX9
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All DBs
Position
23:complement(15709677..15788526)
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AA seq
972 aa
AA seq
DB search
MEEPADSPGPSAPVTEVRCSAARPLRLLEWKVKPGSLVNVDSVLALCVPVAAEREAGAEL
ETPMPGRQPEKRVKSDRAGVVRELCCQLGQVVPPGGVLVRLEECSHPIVMKGLCAECGQD
LTQLQSKNGKQQAPVSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLD
QTLIHTTEQHCQHMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSR
LYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKF
APNLITVKKYTYFQGTGDINAPPGSREAQMAKRANHMSKPAESLDNTPLPVAPEEQSNGI
RKRGKERPVGRGTTEHEERGITGRGGEGLSSQEEPDERTHSFGEGAETLRISSGPSATDA
EDGGAAEATVDTPTRGTTSSDRTSNDLEFDLSSDSESDVALANPSSSDSEVEGTRTWRKK
QEAGGVELTSETEPAREAELVATEDQVEGEKHPGEDGISEQEGLRELDNGCLDKKEAETE
SQNSEQSGVTMGEESLDQSIEEEDEGEEPDLDQDDHLIYLEEVLTRIHSEYFTRYEAFLK
KESPEMPDIRKIVPELKSRSLGGTTIVFSGLYPTNYPMERTREFYHANALGAKIQRNLLL
NPKDPDHTTHLIAARAGTEKVRQAQGCRHLHVVNPDWLWACLERWEHVEERLFPLKEDYA
KAQRSSSPATFPDLQGPSHSAVFQPMPAQPKPPPAPEVRTYNPITGKLIRRGPQGPRQPS
YIQAPTQEGQSSFRVVQQPTQQERVPSSQDEEQPGPSRRKRQPSMSETMPLYTLCKEDLE
SMDKEVDDILGEESDNESDGGRKEEKMEDEGIAEEEEEERPAVSQLKALETDVREEAKVA
AQEETGSTGSAPRGHKRKLEDIKDDDNEDGSNDGGADTISESSRESNEDEEGSSSEADEM
AAALEAELNDFM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcctgcggactctccgggcccctcggcgccggtgacggaggtccgctgctcg
gccgctcgtcccctccggctgctcgagtggaaggtgaagccgggctcgctggtgaacgtg
gactcggttctggcgctgtgcgtcccggtggcagcagagcgggaggccggagccgagctg
gagacgccgatgccggggagacagccggagaagagggtcaagtcggaccgcgccggggtg
gtgcgggagctttgctgtcagctggggcaggtggtccccccggggggtgttttagtgcga
ctggaggaatgcagccatcccattgtgatgaagggtctgtgtgctgaatgtggacaggac
ttgacccagctgcagagtaagaatggcaaacagcaagcgcctgtctccacagcgactgtg
tccatggtgcacagcgtcccagaactgatggtcagctcagagcaagccgagcagctgggg
agggaggaccagcagcggctgcaccggaaccgcaagctggtgctcatggtggacctggac
cagacactgatccacaccacagagcagcattgccagcacatgtccaacaaggggatcttc
cacttccagctgggccgaggggagcccatgctacacacacgcttgcgcccccattgcaag
gacttcctggagaagatcgccaagctctatgaactgcacgtgttcaccttcggcagccgc
ctgtatgcacacaccatcgcaggctttttagatcctgagaagaagctcttctctcatcgg
attctatcaagggacgagtgcattgaccccttctccaaaacagggaacctcaggaatttg
tttccctgtggtgactctatggtttgcatcattgatgaccgagaggacgtctggaaattt
gcaccaaaccttatcacagtgaagaaatacacctatttccagggaacgggagacatcaat
gctccacctggctcgcgggaagctcagatggcgaagagagctaaccacatgagcaagcca
gcagagagcctagacaacacaccgctgcctgtggcacccgaggagcagagcaatggcatt
cgcaagcggggaaaggagcggcctgtaggacggggtacgacggaacatgaggaaaggggg
atcacgggtaggggaggcgagggcctcagctctcaagaagagcctgacgaacggactcac
tcttttggggaaggggcagaaaccctgcggattagcagtggcccaagtgctacagatgcg
gaggatggtggtgcagcagaggcaactgtagacacgcccaccaggggtacaacctccagt
gacaggaccagcaacgacttagagtttgacctgtccagcgacagtgagagtgatgtggcc
ttggcgaacccctcgtcttcagacagtgaggtggaggggactcgtacttggaggaagaag
caggaggctggaggggtggagctgacaagtgagacggagcctgctagagaagcggagctg
gttgctacggaagaccaggtggagggagagaaacacccaggagaggatggcatttcagaa
caggagggcctccgggagctggacaacggctgtttagataaaaaagaggcggagacggag
tcgcagaacagtgagcaatcaggagtgactatgggggaggagtctttagaccagagcatt
gaggaggaggatgaaggagaggagcctgacctcgaccaggatgatcacttgatctacctt
gaggaagttctgacacgaattcacagcgagtatttcacccgatacgaggccttcctgaag
aaggaaagccccgagatgcccgacatccggaagattgttcctgagctcaagagcaggtcc
ctggggggcaccacgatcgtgttcagcggtctgtaccccaccaattaccccatggagaga
acccgagagttctaccatgccaacgcactaggagccaaaatccagaggaaccttctcctg
aaccccaaagacccagatcacacaacccacctcattgcagcccgagctggcactgaaaag
gtgcgtcaagctcagggctgtcgacacctgcacgtggtgaaccctgactggctgtgggca
tgcctggagcgctgggaacatgtcgaagagcggctcttccccctcaaggaggactatgcc
aaagcgcagagaagcagcagtccagccacgttcccagatctccaaggtccctcccactca
gctgttttccagccgatgccagcccaaccaaagccccctccagccccggaagtacggaca
tacaaccccatcacgggcaagctgatccggagaggtccgcagggcccccgccagccctcc
tacatccaggcccccacacaggaagggcagtcctcattcagggtggtgcagcagcctacc
cagcaggagcgggtcccctccagccaggacgaggaacagccaggcccctcgcggaggaag
cgacagccaagcatgtcggagacgatgcccctctacacgctgtgcaaggaggacctggag
agcatggacaaggaggtggacgacatcctgggggaggaaagtgataatgagagcgacgga
gggaggaaagaggagaagatggaggatgagggcatagctgaagaagaggaggaagagcgg
ccagcggtaagccagctgaaggcgttggagacagacgtacgggaggaggcaaaggtggcc
gcccaagaagaaactggctcgacaggaagtgctcccaggggtcacaaacggaagttggag
gacatcaaggatgatgataatgaagatggcagcaatgatggaggcgccgacacaatcagc
gagtccagcagggagtccaatgaggacgaggagggcagcagctcggaggcagatgaaatg
gctgctgccctggaggctgaactgaatgacttcatgtga
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