Scleropages formosus (Asian bonytongue): 108919315
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Entry
108919315 CDS
T04919
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sfm00535
]
108919315
Proteoglycans [BR:
sfm00535
]
Extracellular matrix (ECM) proteoglycans
Others
108919315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_3
DUF4959
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
108919315
NCBI-ProteinID:
XP_018582745
LinkDB
All DBs
Position
23:18497295..18568512
Genome browser
AA seq
1856 aa
AA seq
DB search
MKTYSPLLLLALAALFTVPAQGQVSPPRRLRFKVPSLGKLLVSWKEPRGDFDSYVIIYNT
EPDGKEKELHMSKAESKAVIEHFNPSMKYRVKVIAVSGSQRSKPLEGYYAVQHREPGSEA
VAPQGMKDTSVVEESNEISGAEQFECKTPAIADIVILVDGSWSIGRINFRLVRTFLENLV
SAFNVGFDKTRIGLTQYSGDPRTEWHLNAYTTKDAVIDAVKNLPYKGGNTLTGLALNNIL
EYSFKPESGARPGVPKIAILITDGKSQDDVIPPAQSLREAGIEVFSIGVKNADENELKAI
ASPPEDTHVYNVADFSAMGTIIDSLTRALCERVEQQDMEIKGDSGGQTMVASPQDLVTSE
VTARSFRVSWTHPPGTVEKYRVVYYPTRGGQPDEVVVDGSENSVVLSYLNSLTEYQIAVF
AVYTSSASEALRGRETTLALPMVNNLELYDVTHNSMRASWNGVEGASGYMILYAPLSDDG
SADEKEVKVEGSVNEIELEGLSPATEYTVTVYAMYGEEASDPMTSQKTTEPLLPPRNLRF
LDVDHSSARLTWEAASRKVKGYRIMYVKTNGIQPKEVEVGPVTTLQLRNLTSQTEYTVAI
FALYDDGQAEPHTGSFTTKLVPEPLDLRISDVSTDSFRVSWTHAASDIVLYRLSWTPVKG
GESKEMLLNGNVDTILLSDLRPLTEYEVSLAAIYSDEKESDAVATFESTMERTTTIATTT
AVVRQAVKNLLIGEETTFSLQVSWQLQDPNVRQYRISYVTARGDRAEESVIVPGWQNNLL
LQPLLSDTEYKVTVTPVYASGEGPSMSRVSRTLPLIAPKNLRVSDEWYNRFRITWDTPPS
PTMGYRIVYQPVSAPGPALETFVGDDVNSMLILNLLSGTEYSVKVISSYTTGSSEALVGK
AKTLYLGVSNLGSYQVRMKSMCAQWQAHRHANLYRVVIESLLNGHKQEVTLGGGASQHCF
YNLSPNTQYKISVYAQLQDLEGPAVTVIDKTLPVPTEPPTLPPTTTTQSTIPSAKEVCKA
AKADLVFLVDGSWSIGDDNFQKIIRFLHSTTGALDQIGPDGTQVAIAQFSDDARTEFKLN
SYKEKETLLAAIQSISYKGGNTKTGRAIKHVKESIFTVEGGTRRGIPKVLVVLTDGRSQD
DVNMISKEMQMEGYIIFAIGFADADYGELVSIASKPSERHVFFVDDLDAFKKIEEKLVTF
VCEAATATCPSVLMKGSTLAGFRMMDLFGLTEEQYGSMDGVSMEPGTFNSFASYGLHKDA
LVSQPTKYLHPEGLPSDYTITVLFRLLPDTPQEPFALWEILNKDNEPLVGLILDNGGKTL
TFFNYDYKGDFQTVTFEGPDIRKIFHGSFHKLHVAISKITAKAFVDCKQVGEKPISAAGN
VSADGQEVLGRMVRSRGTRDNSAPFQLQMFDIVCSNSWPSRDKCCELPGLRVEEDCPALP
HACTCSQDSKGPPGPPGSPGGPGIRGARGERGEPGPVGPQGSLGDPGPPGPQGLPGPQGP
SGLSIQGPKGPPGEKGVKGDVGPQGTQGVPGASGSPGRDGPAGQRGLPGKDGPAGRPGPT
GTIGPPGAPGLPGPSGPPGALGDQGPPGPPGARGEKGERGDVQSQAAVQAIARQVCEQLI
QSHMARYSSILNHIPSQPVSVRTVPGSPGEPGRPGPRGSQGEQGPPGRPGFPGSNGENGR
PGERGLPGEKGEKGSQGVGIQGPRGPQGPPGPPGEGRPGSQGSAGRPGNPGTPGRPGIPG
PTGPAGPPGYCDQNSCLGYNGGVPLPPESYQTYGNEEEEDDPYEGYRGYSHQYYQPNYPI
PRPVGPQPLPTDDAIEVRSPGVNRFARSLSRRKRNPGAVRQRKSLDSKAGMGETPN
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgtattctccacttctccttctggctctggctgcactttttaccgtgccagcc
cagggtcaagtttcacctccacgaaggttacgttttaaagtaccgagtttgggaaaattg
cttgtatcgtggaaagagccaagaggagattttgacagctatgtaattatttataacaca
gaaccagatggcaaggaaaaggagttgcacatgtccaaggcggagagcaaagcagtaata
gagcatttcaatcccagcatgaaatacagagtaaaagtcattgcagtgagtggtagccag
cgcagtaaacccctggaaggctattatgcagtgcagcaccgagagccgggtagcgaagcc
gtcgcaccgcagggaatgaaggacacgagtgtggttgaggagagcaacgagatatctgga
gctgagcagtttgagtgtaaaactccagccatcgcagacattgtcatcctcgtcgatggc
tcgtggagcatcggcaggataaacttccgcttggtccgcactttcctggagaatttggtg
agcgccttcaacgtgggattcgacaagacacggataggactgacccagtatagcggtgac
cccaggactgagtggcacctcaatgcttacaccaccaaagatgctgtgattgatgcagtg
aagaacttgccttacaagggaggaaacacactgacaggtctcgctctgaacaacatcctg
gagtacagcttcaagcccgagtctggagccaggccgggtgttcccaaaattgccatcctg
atcaccgacggcaagtcacaggatgatgtcatccctcccgcacagagtctacgggaggcc
ggcattgaggttttctctattggtgtgaagaacgctgacgaaaacgaactgaaggccatc
gcctcgccgcccgaggacacgcatgtctacaacgttgccgacttcagtgccatgggcacc
atcatagacagcctcacgagggcactgtgcgagcgagtcgagcagcaagacatggagatc
aaaggagactcaggtggtcagacaatggttgcatcccctcaggacctggtaacatccgag
gtgactgccaggagttttcgcgtgtcctggactcatccgcccgggacagtggagaagtac
cgtgttgtttactacccgaccagagggggccagccagatgaggtagtggtggatggcagt
gagaattcggtggtgctgagctacctgaactcgctgacggagtaccagatcgctgtgttt
gctgtgtacacgtcgtcagccagcgaagccctcagggggagggagaccaccctggcccta
cccatggtgaacaacctggagctgtacgacgtgacccacaacagcatgcgggcaagctgg
aacggagtggaaggtgcgtccgggtacatgatcctgtacgcccccctgagtgacgacggc
tctgccgatgaaaaggaggtgaaggttgaggggtctgtgaatgagattgagttggaggga
ctcagccctgccacagagtacaccgtgactgtgtatgccatgtatggggaggaggccagc
gatcccatgaccagtcagaaaaccacagagccccttcttccaccgaggaaccttcggttc
ttagatgtcgaccacagctccgccaggctgacctgggaggccgcatccagaaaggtcaag
ggttaccgcataatgtacgtgaagaccaacgggattcaacccaaagaggtggaggtgggt
ccggtcactaccctacagctgcggaacctgacatcccagacggagtacacggtggccatc
tttgccctctatgacgacggtcaagctgagccccacacaggcagcttcactaccaagctg
gttccagaacccctggacctcagaatcagcgatgtgtcaacagacagcttccgggttagc
tggacacacgctgcctcggacattgtgctgtacaggctgtcctggacacctgtcaaagga
ggggagtcgaaagagatgcttttgaatggcaacgtggacaccatcctgctgagtgacctt
cggccgctgacagagtacgaggtgtccctggctgccatctacagtgacgagaaagagagt
gatgcagtggccacctttgagtcgacaatggaaaggacaacaaccattgcaaccacaaca
gcagtggtgcgccaggctgtgaagaacctgctcattggtgaggaaaccaccttcagcctc
caggtgtcctggcaactccaagaccccaatgtgcgacagtaccgcatttcctacgtcact
gccagaggtgaccgtgccgaggagtcggtcatagttcctggttggcagaacaacctgctg
ctgcaacccctactgtccgacaccgagtacaaggtcaccgtcacccctgtgtacgccagc
ggggaggggccgagcatgtcccgcgtgagccgcaccttgcctctcatagcgcccaagaat
ctgagagtatcggatgaatggtacaaccgtttccgcatcacatgggacacgcccccctcg
ccgaccatgggctacaggatcgtgtaccagccggtctcagctccaggtcctgccctggag
acctttgtgggggatgatgtcaactctatgttgatcctgaacttgctgagtgggaccgag
tacagcgtcaaggtcatctcgtcctacaccaccggctccagcgaggcacttgtcggcaaa
gcgaagacgctgtatctgggcgtgtcgaacctcggcagctaccaggtgcgcatgaaaagc
atgtgtgctcagtggcaggcccatcgccacgccaacctctaccgggtcgtcatcgaatcc
ctgctcaatggacacaaacaggaagtgacccttgggggtggggcttcccagcactgcttc
tacaacctctcccccaacacccagtacaagatcagcgtctatgcccagctgcaggacctc
gagggccccgctgtcaccgtcatagacaaaacacttcctgttccgacagagcccccgaca
ctgccaccaacaaccacaactcaatccaccatcccctctgcgaaagaagtgtgcaaagca
gccaaggccgacctggtcttcttggtggatgggtcctggagtatcggggacgacaacttc
cagaaaatcatccgcttcctccacagcaccaccggagctctggaccagattggcccagac
ggcactcaggtggccatcgctcagtttagtgatgatgcccggacagagtttaagctcaac
tcctacaaagaaaaggagacgctgctggctgccattcagagcatctcatacaaaggagga
aacaccaagacaggtcgggctataaagcatgtgaaggagtcaattttcacagtggaaggg
ggcacgaggagagggatcccaaaagttctggtggtgctcacagacggccggtcccaggat
gacgtcaacatgatctccaaagagatgcagatggagggctatatcatcttcgccattggc
tttgctgacgcggactatggggaactggtgagcatcgccagcaagcccagtgagaggcat
gtgttctttgtggatgacctggatgccttcaagaagatcgaggagaagctggtgaccttt
gtctgcgaggcagctaccgccacttgtccatcagtcctgatgaaggggagcaccttagca
ggcttcaggatgatggacctgtttgggctgacggaggagcagtacggaagcatggatggg
gtgtccatggagcccgggacgttcaacagcttcgccagctacggcctgcacaaggacgcc
ctcgtctctcagcccaccaagtatctccacccagaaggcttgccgtctgattacaccatc
actgtgctgttccgtctgctgccagacacaccgcaggagccctttgcattgtgggagatt
ctcaacaaagacaatgaacctctggttggcctcatcctggataacggagggaaaaccctg
acgttcttcaactacgactacaaaggagactttcagacagtaacttttgagggaccagat
atcaggaagatctttcatggcagcttccacaagctgcacgtggccatcagcaagatcaca
gccaaggcgtttgtggattgcaagcaagtaggcgagaagcccatcagcgcggcaggcaac
gtcagtgcggatgggcaggaggtcctgggcaggatggtccgctcgcggggcaccagggac
aactctgctcctttccagctccagatgttcgacattgtgtgcagcaactcatggcccagc
cgagataagtgctgtgaactcccgggcctgagggtggaggaggactgccccgctttacct
catgcctgtacctgctcccaggacagtaaagggccacccggacccccgggatccccgggc
ggaccaggcatccgaggtgcgagaggagagcgaggagaaccaggtccggtgggtccccaa
ggttcattaggtgatcctgggccaccgggtcctcaaggcctccccggaccccaaggccca
agtgggctgtccatccagggaccaaagggcccacctggagagaaaggtgtcaagggtgat
gtgggccctcaggggactcagggtgtacccggtgcttctggctcaccaggacgtgacggt
ccagcaggacaaaggggactgccaggcaaagatggtccagctgggcggccaggccccacc
ggaaccattggcccgcctggagctcctggactgcctggtccaagcgggccacccggagca
ctcggtgaccaaggaccacctggtccccccggtgccagaggtgaaaagggtgaaagaggt
gacgtgcagtctcaagcagctgtgcaggccattgctcggcaggtgtgcgaacagctcatt
cagagtcacatggctcgctacagctccattctcaaccacattcccagccagccagtgtcc
gtgcgcactgtcccagggtcccctggagagccaggtcgaccgggcccccgaggatcccaa
ggagagcagggtcctcctggcagaccaggcttccctgggagcaacggggagaacgggcgg
ccaggggagagaggtttgcccggagagaagggcgagaagggaagccaaggggtcgggatt
caggggccgagaggacctcagggacccccaggaccgcctggagaaggtcgacctggcagc
cagggatcagccggaaggccgggcaacccagggacacctggacgacccggcatccctggc
cccaccggtcctgctggaccacctggctactgtgaccagaactcatgcctgggctacaat
ggtggagtaccactgccccccgagtcctaccagacatacggcaacgaagaggaggaggac
gacccgtacgagggatacaggggctattctcaccagtactaccagcccaactaccccatc
cctcgccccgttgggccccaacctttgcccacggacgacgccattgaggtgaggtcaccc
ggcgtcaaccgcttcgccaggagcctctcgaggaggaagagaaaccctggcgccgtgagg
cagaggaaaagtttggacagcaaagccgggatgggagagacccccaactga
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