Scleropages formosus (Asian bonytongue): 108919367
Help
Entry
108919367 CDS
T04919
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04140
Autophagy - animal
sfm04142
Lysosome biogenesis
sfm04145
Phagocytosis
sfm04148
Efferocytosis
sfm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
108919367 (vps18)
04142 Lysosome biogenesis
108919367 (vps18)
04140 Autophagy - animal
108919367 (vps18)
04148 Efferocytosis
108919367 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108919367 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfm04131
]
108919367 (vps18)
Membrane trafficking [BR:
sfm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108919367 (vps18)
Hops complex
108919367 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
aq_1631
DUF2175
zf-RING_2
zf-RING_Vps41
zf-ANAPC11
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-RING_16
RBSN_mid
DUF4446
DUF1664
DUF5600
zf-RING_5
KNOX2
zf-C4H2
CLIP1
LETM1_C
Motif
Other DBs
NCBI-GeneID:
108919367
NCBI-ProteinID:
XP_018582829
UniProt:
A0A0P7X6Q7
LinkDB
All DBs
Position
15:complement(20814497..20820427)
Genome browser
AA seq
978 aa
AA seq
DB search
MASILDEYEDSQNTARPAQHRSRFSASNIGIAHSGFVNARLEEEKPIFNKQRIDFSPPEK
INHFAVCNNQLCMSLGRDTLLRIDLGKPDQPNQIELGRKDQSSVYKLFLDPTGSHVVISL
STSECLYLNRNTQKVRSLSRWKGHLIESVGWNKLLGTETNTGPILVGTTQGLIFEAEISA
SEGSLFNTNPDQYFRQVHLLEEDGDTAPVCCLEMERGLESKCFIIATTRKRLFQFVGKVA
EGSEQQGFSSIFSQNQDLLPSFQEFPVNMGYSEIAFYTSKLRSCPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTESIDTCKPLSIVLTQFHFLLLLPDRVKAVCTLNGQVVHEDV
FPEKFGPLRKMVKDPIGGLVWIYTEKAVFRYNIQREARDVWQMYMSMEKFDLAKEYCRDR
PECLDIVLAKEAEHCFQNKRYVESAKCYALTQNYFEEIALKFIEARQEEALKEFLLKKLS
NLKLSEKTQITLLVTWLTELYLNRLGLFEADDSKNALFVETREEFHSFLSNPKYKECFYN
NRSTIYDLLASHGNVDDMVHFAVVMQDYERVVSHHCQHEDYGAALEVLSKHCDVKLFYKF
SPVLMQHIPMRVVEAWMNVGKKLDAKKLIPALVNYSQIGSTQQINETIRYMEFCVYQLGE
TDEAIHNYLLSLYAKYRPESLLWYLEQEGKHSSDVHYDLKYALRLFAEHGHHRACVHVYK
IMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMHCLS
SCNLLKIEDVLPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKRIREDIQ
QMRNKYGVVESHEKCATCDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLSSYRQAKLEEL
QKKLAAASQPAKNRQRVKEEEAAAGSLSKGQLSREQIKSDIDDIVASECVYCGELMIRSI
DKPFIDPQKFEEEKLSWL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatcctggacgagtacgaggactcccagaacacggcgcgccccgcgcagcac
cgctcgcgtttctcggcctccaacatcggcatcgcgcactccggcttcgtgaacgcgcgc
ctggaggaggagaagcccattttcaacaagcagcggatcgacttctctccgccagagaag
atcaaccactttgcggtgtgcaacaatcaactgtgtatgagcctgggccgagatacgctg
ctgaggatcgatctaggaaaacccgatcagcctaatcaaatagaactgggcaggaaagac
caaagcagtgtctacaagctgttcctggaccccacagggtcccacgtggtgattagcttg
tccaccagtgagtgcctatacctgaacagaaacacccagaaggtgcggagcctgtctcgc
tggaagggccacctgatagaaagtgtgggctggaacaaactgctgggcacggagaccaac
acgggccccattcttgtgggcaccacccaaggcctcatctttgaggcagaaatctcggcc
tcggagggcagcctgttcaacacgaaccccgaccagtacttccggcaagtccacctgctg
gaggaagatggagacacggcaccggtctgctgcctggagatggagcgtggccttgaatcc
aagtgcttcatcattgccaccacgcggaagcgcctgttccagttcgtggggaaggtggca
gagggatccgagcagcagggcttcagctcgatcttcagccagaaccaggacctcctgccc
agcttccaggaattccccgtgaacatgggctacagcgaaatcgccttctacacctccaag
ttgcgctcgtgccccaaggcctttgcatggatgatgggcaacggcgtcctctacggtcag
ctggactacgtgcgtcccgactcgctgctcagcgacgtccaagtgtgggagtacacggaa
agcattgacacctgcaagcccctctccattgtcttgacacagttccacttcctgctgctg
ctcccggaccgcgtgaaggctgtgtgcaccttgaatggccaggtggtgcatgaggacgtc
ttcccggagaaatttggccctttgaggaaaatggtgaaggaccccatcggcgggctggtg
tggatttacactgagaaagcggtcttccgctacaacatccagagggaggcgcgcgatgtt
tggcagatgtacatgagcatggagaagtttgacctcgccaaggagtactgccgcgaccgg
cccgagtgcttggacatagtcctggcgaaggaggcggagcattgcttccagaacaagcga
tacgtggagagcgccaagtgctatgccctcacccagaactactttgaggagatcgccctg
aagtttatcgaggcacggcaagaggaagccttgaaggagttcctgctgaagaaactgagc
aatctcaaattgagcgagaagacccagatcaccctgctggtcacgtggctcacggagctc
tacctcaaccgactggggctctttgaggcggatgactccaagaatgctctctttgtggag
acccgtgaggagtttcacagtttcctcagcaatccaaagtacaaggaatgcttctacaac
aaccgcagcaccatctacgacctcctggcgagtcacgggaacgtggacgacatggttcac
ttcgctgttgtcatgcaggactacgagagggttgtctcccaccactgccaacacgaagac
tacggcgctgccctggaggtactctccaaacactgcgacgtgaagctcttctacaagttc
tcccccgtcctcatgcagcacatacccatgagagtggtggaggcgtggatgaacgtaggc
aagaagctcgatgctaagaagctcatcccagcgctggtgaactacagccagattggcagc
acccagcagatcaacgagacgattcgctacatggagttctgtgtttaccagcttggtgag
acggacgaggccatccacaactacctactgtccctctatgcaaagtaccggcccgagtcg
ctgctgtggtacctggagcaggaagggaagcactcctcggacgtccattacgacctcaag
tacgctctgcggctgtttgctgaacatgggcaccaccgagcatgtgtccacgtctacaag
ataatggagctctacgaggaggctgtggatctggcactacaggttgacgtggacttggcc
aaatcgtgcgcagacctgccggaagatgacgaggagctgaggaagaagctgtggctgaag
atcgcccgccacgttgtgcaggaggagaaggatgtgaagaaggccatgcactgcctgtcg
agctgcaacctgctgaagattgaggatgttcttcctttcttcccggactttgtcaccatc
gaccacttcaaggaagccatctgcagctccttggaggagtacaacaagcacatcgaagag
ctgaagcaagagatggaggaggccacggagagcgccaagcgcatccgggaggacatccag
cagatgaggaacaagtacggagtggtggagtctcacgagaagtgcgccacctgtgacttt
cccctgctcaatcggcccttctacctgttcctgtgtggccacatgttccattacgactgc
ctcttccaggaggtcacccctcacctgtcctcctacaggcaggccaagctggaggagctg
cagaagaagctggcggctgccagccagcctgcgaagaatcggcagcgggtaaaggaggag
gaggctgcagccggttccctcagcaagggccagctcagccgcgagcagatcaagtcggac
attgatgacatagtggccagcgagtgcgtgtattgcggggaattgatgatcaggtccatt
gataagcctttcattgacccacagaagtttgaggaggagaagctcagctggctgtaa
DBGET
integrated database retrieval system
