Scleropages formosus (Asian bonytongue): 108919560
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Entry
108919560 CDS
T04919
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03022
Basal transcription factors
sfm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108919560 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
108919560 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108919560 (mnat1)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108919560 (mnat1)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108919560 (mnat1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108919560 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-UDP
zf-C3HC4
DUF2096_N
zf-RING_2
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
108919560
NCBI-ProteinID:
XP_018583124
UniProt:
A0A8C9V3B0
LinkDB
All DBs
Position
15:17622100..17650472
Genome browser
AA seq
310 aa
AA seq
DB search
MDDQSCPRCKTTKYRNPSLKLMVNVCGHTLCESCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKRETDFPNLRQYNDYLEQVEEIVFNLTNNIDVENTKR
LMEHYQRENRDIIQRNKAKLTREQEELEELLMLEQKETEQRRLDTLQEEQRQLLAKKKKK
QALLDELESSRLPAMLLLAQHKDRAAQLETQIEIQRQVVKPTIFSTGIPMGQTISLQPVV
QMEEVLYRYQPLRINTYGPPVPEFEQLGRLGYLTHVRAASPQDMAGGYSSALACHRALQD
AFSGVFPLQH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccagagctgtccgcgctgtaagacgacgaaatacaggaacccgtctctaaaa
ctgatggtgaacgtgtgcggacacacgctgtgcgagagctgcgtggagatgctgttcgta
cgcggttcagggaactgcgtgcagtgcgacacaccgctcaggaagagcaacttccgcgtg
cagctgtttgaggacccagctgtggacaaggaggttgagatccgcaagaaggtgctgaag
atatacaacaaaagagagacagacttccccaacttgcggcagtacaatgactacttagag
caggtggaggaaatagtctttaatctgacaaacaacatagacgtggagaacaccaagcgg
ctcatggagcactaccagagggagaacagagatatcattcagaggaacaaggccaagctg
acgcgggaacaggaggagctggaggagctgctgatgctggagcaaaaggagactgagcag
cggaggctggatacactgcaggaggagcaaagacagctgctggcaaagaagaagaagaag
caggcccttctagatgagctggagagttcacggctacctgccatgttgctcctggctcag
cacaaggaccgggccgctcagctggagactcagatcgaaatacaacggcaggtcgtcaag
cccaccatcttttccacggggattccgatgggccagacaatatccctgcagcctgtggtc
cagatggaggaagttctataccgctaccagcctctacggatcaacacatatggcccccct
gtcccagagttcgaacagctgggccgcttggggtacctgactcatgtgcgtgctgcctcc
ccccaggatatggcagggggctacagctcagccctggcctgccacagagcgttgcaggac
gctttcagtggcgtgttccctctacagcactga
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