Scleropages formosus (Asian bonytongue): 108919600
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Entry
108919600 CDS
T04919
Symbol
rpap1
Name
(RefSeq) RNA polymerase II-associated protein 1 isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfm03021
]
108919600 (rpap1)
Transcription machinery [BR:
sfm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108919600 (rpap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
108919600
NCBI-ProteinID:
XP_018583220
UniProt:
A0A8C9S5C4
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All DBs
Position
15:complement(21873866..21905114)
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AA seq
1408 aa
AA seq
DB search
MLKRPSSSDSEADLLRAQECFLAAGVPSAVRVLRRPEKRRGEPSGCAGEEKAEEEEEVMV
SCRDVVTITEHSEQIPSLTPGPSKKSCFRAEQVCFVDEDPEAELERKDTHVTAVLSRIIE
HDTSAVPVSFPAFTGAAFPKVFHRSEVEDQGITVAQKCRKSIFAQKIAAQKIAAQRARGK
GLTGGDPVQPTLVPQGTSCAPLASMETASLPSGSEEHAVSETSRLVTGLGLSGHNGSLEA
KKIHEENEAKLHGMSQSEILEEQRRLLSQLEPRLVDFVKSRKPHGGCQPSAAPLPAKEEQ
QHCFSEHISQEVEMEDVEANVAPAPPITEDELPVKPEKGWLHMDKLEPEKLEWMRDLPAS
RKRSTKKAMQARFNFDGVLISPTEDLPTHLGLHHHGDEPELAGYSLQELFLLSRSQVTQQ
RCLALTTLGHILTKARASDFASSVRGSVFATLLDAGLLFLLRFSLDDKYEGLMAAAVQAL
RALLVTVDDEECLDNTFSWFLGMATFPLLPFAQEEDKEDDEGLEDALKETAKEKEEKKSD
HDVARNDVIKGLLRMKLLPRLRYILEVLRPPPRTVLDILEILIRIARHSPTSAIQVLDCP
RLMNTVMSEFLPCSWSPPVSPTPDRLHGFPVAAAMKLVRILATAGRHTCARLLNSLGARE
RISCFVAQEPQDLLLEPGEALRISTEALRLWAVAAGYGQACDLYRDLYPILVQTLQSHPM
RWPPGHVLRPLELQRVQALHTLLTNVTHTAGCHQELQASLTSPQETECPPPPSVEWGHVT
GLQPPLLASLKACVKLLDEPGQKENILSLLPSHLLYLGAFYSQLSAQSSFQPVDCLQELE
VLTSEVLIPLLSHQAICDLIGNLKSCSALCNPLSCSDPEMVPSLPSLTWSGGKPALSLSG
SNSPFPFLIALCYLLEVLSSIHKGIAHKFSHLLLSSALMMYLQACCQAMPTVSLFSAWPL
WHEQHLLYLLVKLALRLVPVSSEVEKQISLYHRVAATMVPWLLPGSEYLARDLLSTVIFN
LDLITEGRCGGPEAADLSELQLQEGGSFGHFPVGPLMRDACAQLPSIRGCYLTHLASLEP
TILYSRDRHLMRTPWVRSWMLPEVQGPILPSDWPFLPIISLYERVGIPGGGDMQVEALPQ
ASVKSVVHSLQWLLILERWRDGVLQAVTPAAKLARLSCLFLCSSDLFLERPVQQLTWALL
RSLCVPARLAALDLGVPLPGLASFHDLYASLLSQFEAVSFGDHLFCCFVLLPLQQRFSVS
LRLALFGEHVGLLRSLGLPLQQLPVPLEQFTYPPEDSLTLLRLYFQVLVTGALRCAWCPV
LYVVALAHLNAFIFSQDVVSQEVDAARRSMLRKTYYLTDEVLKDHLLLFKVPHLQKELGF
DAYEHLPPIRARRLESVVGMEEGESLKT
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcgtccctcgtccagtgactcggaggctgacctcctgcgggctcaagagtgc
ttcctggcagctggtgtcccttcggcggtccgtgtgctgcggaggccggagaagcgcaga
ggggaacctagtggatgtgctggagaggagaaggcggaggaagaggaggaggtcatggtt
agttgcagagatgttgtaacaatcacagagcactcagagcaaattcccagtttgacacct
ggcccgtccaagaagtcttgctttagagctgaacaggtgtgttttgtggatgaggaccct
gaagcagagctggaaagaaaggacacacatgtgaccgcagtcctgtccaggattattgag
catgacacaagcgcagttcctgtttccttcccagctttcactggagctgcttttcccaaa
gttttccatcggtcagaggtcgaggaccaggggataaccgtggcacagaagtgcaggaag
agcatttttgctcagaagattgctgctcagaagattgctgctcagagagcacgagggaag
ggcctaactggtggtgatcctgtgcagcctacacttgtccctcaggggacatcctgtgca
ccattggcatccatggagaccgcatcactgccttctggaagtgaagaacatgccgtatca
gagacttccaggctggtcacggggctcggacttagtgggcacaatggttccctggaagcc
aagaagatccatgaagagaatgaggccaagcttcatggcatgtcccagagtgagattctg
gaggagcagagaagactgctgtctcagctggaaccccgattggtggactttgtcaaatct
cgcaaacctcatggtggctgccaaccttcagcagctccacttcctgctaaggaggagcaa
cagcactgcttcagtgagcacatttctcaggaggtggagatggaagatgtagaagccaat
gtggcccctgcacctcccattacagaggatgagctgccagtcaaacctgagaaggggtgg
ttgcacatggacaagttggagccagagaagctggaatggatgagagacctgcctgcctca
cgaaaacggagcaccaagaaggccatgcaggcacgtttcaactttgatggggtcctcatc
tctccaacggaggacctgccaacacatctgggtctacatcaccatggcgacgaacctgag
ctggctgggtactcgctgcaggaactcttcctcctgtcgcgcagtcaggtcactcagcag
cggtgcctggccctaacaacccttggccacatcctcaccaaggctcgtgccagtgacttt
gcctcctctgtgcggggctctgtgtttgccacactcctggatgccggcctgctttttctg
ctgcgcttttccctggatgacaagtacgaggggttaatggcagctgcagtgcaggccctt
cgtgccctgctggtgactgtagacgatgaggagtgtctagacaacactttctcgtggttc
ctcgggatggctaccttccccctgttaccctttgcccaggaagaagataaagaggatgat
gaaggactggaggatgccttgaaggaaactgccaaagagaaggaggagaaaaagtcagat
catgatgtggcacgaaatgatgtaatcaagggcttgttgaggatgaagctcttgcccagg
cttcgctacatcctggaagtgttgcgtcctccgccccgcactgtccttgatattctggag
atccttatccgaatcgcccgccactcacccacttctgccatccaggtactggactgcccc
cggcttatgaacactgtcatgtcagagtttctgccttgttcctggagccctcccgtatct
cctacacctgaccggctgcatgggtttcctgtagctgcagcaatgaagctggttcgcata
ctggccactgctgggaggcacacctgtgcaaggctgttgaacagcctgggagcccgggaa
cgcatttcctgcttcgttgcccaggaaccccaagatctgttgctggagccaggagaggct
ttgcgcatcagcactgaggccctgcgcctatgggcggtggctgccggctatggacaggcc
tgtgatctctacagagacctgtatccgatcctggtgcagaccctgcagtcacatcccatg
aggtggccacctggacatgttttgcgacctctagagctacagagggtgcaggctttgcac
acactcctcaccaatgtgacacacacggctggttgtcaccaagagctgcaggctagccta
accagcccccaggaaactgaatgccctcctcctccttcagtagaatggggtcatgtcact
ggtctgcaaccccccttgctggcctccctgaaggcctgtgtaaaattgctggatgagcct
ggccagaaagagaatatattgagtcttctcccatctcacttgctgtacctgggggctttc
tactcccagctcagtgctcagagctctttccaaccagttgactgtctccaggagctagaa
gtactcacctcagaggtcctgattcctctgctgtcgcatcaggccatctgcgacttgatt
ggcaatctcaagtcttgctcagctctctgtaacccgctctcctgctcagacccagagatg
gtgcccagtctgccttcactgacctggtctggtggcaaacctgctctcagcctatctggt
tccaattctcccttcccctttctcattgcactatgctaccttctcgaagtgctctccagc
atacacaaaggcattgcccataagttttctcacctgctcctgtccagcgccctgatgatg
tacctgcaggcatgttgccaggccatgcccaccgtctccctcttcagtgcctggccactg
tggcatgagcagcaccttctgtaccttctggtgaaactggcactcaggctggtcccagtc
agctcagaggtggagaaacaaatatccttgtatcacagggttgctgctaccatggttccc
tggcttttgccaggcagtgaatatctggcccgtgaccttttgtccactgtgatctttaac
ttggacttgatcacggaggggcgctgtggtggaccagaggcagctgatctgtctgagctg
cagctgcaggagggtggctcttttggacactttcctgtgggtcccctgatgcgcgacgct
tgtgctcaactgccttccatacggggatgctacctgacccacctggcctccctggagccc
accatcctttattctcgtgataggcaccttatgcgtactccttgggtccgctcatggatg
cttccagaagtccagggtcctattttgccttctgactggcctttcctgccaatcatcagc
ctgtacgagcgtgtgggcataccggggggaggagacatgcaggtggaggccctcccccag
gcctcagtgaagtctgttgtgcactctctgcaatggctgctgattctggagaggtggcgc
gatggtgtgctgcaggcagtgaccccggcagccaagctagcccgcctgtcctgcctcttc
ttgtgctccagtgacctgttcctagagcggcctgtgcagcaactaacctgggctctcctg
cgcagcctctgtgtcccagctcggctggctgcacttgacctaggggtgcccttgcctggc
ctggcctccttccatgacttgtatgcgtctctcctcagccagtttgaggccgtgtccttt
ggggatcacctgttctgctgcttcgtgctacttcccttgcagcagcgcttcagcgtctcc
ttgaggcttgccttgtttggtgagcatgtcgggttgctgcgctccctggggttgccactg
caacagctgccagtgcctctggagcagttcacctacccaccggaggactcccttaccctg
ctgcggctctatttccaggtcttggtgactggggcattgcgctgcgcctggtgcccagta
ctctatgtggtagccctagcccacctaaatgccttcatcttctctcaggatgttgtatca
caggaagtggatgctgcacgacggagcatgcttcgcaagacctactacctgacagatgaa
gtattaaaggaccacctgctactgttcaaagtgccccatctgcagaaggagcttggcttt
gacgcctatgagcacctgccccctattcgagcccggaggttggagagtgtggtgggcatg
gaggaaggggaatcactgaaaacatga
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