Scleropages formosus (Asian bonytongue): 108919703
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Entry
108919703 CDS
T04919
Symbol
colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm00310
Lysine degradation
sfm00514
Other types of O-glycan biosynthesis
sfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108919703 (colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
108919703 (colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sfm01003
]
108919703 (colgalt1)
Enzymes [BR:
sfm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
108919703 (colgalt1)
Glycosyltransferases [BR:
sfm01003
]
O-Glycan biosynthesis
O-linked Gal type
108919703 (colgalt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
108919703
NCBI-ProteinID:
XP_018583434
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Position
1:complement(325305..331795)
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AA seq
556 aa
AA seq
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MVILVPVLWHKPWNLVLRVHRVATDHNVDNATAVLRERLARVQSSYHRVEWRPREEPRSY
EDEEGPKHWPNQRYEHVMRLRQAALDTAWETWADFFLLVDCDNILTNEDVLWKLVSENKT
IVAPMLESRGTYSNFWCGMTARGYYKRTPAYVPIRRREHKGCFAVPVVHSTFLIDLRKEA
SRQLAFYPPHADYSGAFDDIIVFARSARMAGVRMFVCNEETYGFLPIPLRSHHSLQDEAD
DFLHTQLEVMGDHPPLEPSSFISLPPKHPDKMGFDEIFMINLQRRPHRRQSMLSSLYEQE
ISCKMVNAIDGRALNASQIQAMGIRMLPGYSDPYHGRPLTKGELGCFLSHCGVWKEIVQR
QLKTSLVVEDDVRFEVFFKRRLRNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIRS
LVEADYSYWTLGYMMSLQGASKLLKADPLSKMLPVDEFLPVMYNKHPISDYMEHFETRDL
KAFSAEPLLVFPTHYSGDPGYISDTETSVVWDNKALATDWDRARSRKTQEQEELSNEAQN
ADVLRSPLDSTARDEL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtcatccttgttccagtattgtggcacaagccatggaacctggtgttgcgtgtccac
agggtggcaacagatcacaatgtggacaacgccacagccgtgctgcgcgagcggctcgct
cgggtgcagagctcctaccaccgtgtggagtggagaccccgggaggagccccggagctat
gaggatgaggaggggcccaaacactggccgaaccagcgctacgaacacgtgatgagattg
cgtcaggcagcgctggacacggcctgggagacgtgggctgattttttcctgctggtggac
tgcgacaacatcctgaccaatgaggatgtgctctggaagctcgtctcggagaacaagacc
atcgtggcgcccatgctggagtcccgaggcacctactccaacttttggtgtggcatgacc
gctcggggctactacaagcggacccctgcctatgtgcccatccgcaggcgggagcacaag
ggctgctttgccgttcccgtggtgcactccaccttcttgattgacctgcgcaaggaggcg
tcccgtcagctggccttctatccaccccacgccgactacagcggggccttcgatgacatc
attgtctttgcgcgctcggcccgcatggcaggtgtgcggatgttcgtgtgtaacgaggag
acttacgggttcctccccatcccgctgcgctcccaccactccctgcaggacgaagccgac
gacttcctgcacacgcagctggaggtcatgggtgatcaccctccactggaaccttccagc
ttcatttctcttcctccgaagcacccagacaagatgggctttgatgagattttcatgatc
aacctgcagcggcgcccccatcgacgacagagcatgctgagctccctttacgagcaggag
atctcctgcaagatggtcaacgcaatagatggcagagcattgaatgccagtcagatccag
gccatgggcatccggatgctgcccgggtacagcgacccgtaccacgggcgacccctcacc
aagggtgagctcggctgcttcctctcgcactgtggtgtctggaaggagatcgtgcagcgg
cagctgaagacatcgctggtggttgaggacgacgtacgtttcgaggttttcttcaagcgt
cgcctgcgcaacctgatgagcgaggttgagagccagggcctagactgggaccttatatac
atcgggcggaagaggatgcaggtggacaggccagagaagtcggtgcccaacattcgcagc
ctggtggaggctgactactcctattggacattgggatacatgatgtcactgcaaggtgcc
tccaaactcctcaaggctgatccccttagcaagatgctaccagtggacgagttccttcct
gtgatgtacaacaaacatcccatctccgactacatggaacactttgaaacgagggatctg
aaggcgttctctgcagagcccctcctggtgttcccaacccactacagtggcgacccagga
tacatcagcgacacggaaacctccgtcgtatgggacaacaaagcgctcgccaccgactgg
gaccgagcccggtcccgcaagacccaagaacaagaggagctcagcaacgaggcccagaac
gcagatgtgctccggtctcctctggacagcacagcacgcgatgagctctga
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