Scleropages formosus (Asian bonytongue): 108919758
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Entry
108919758 CDS
T04919
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04137
Mitophagy - animal
sfm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108919758
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108919758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfm03019
]
108919758
03009 Ribosome biogenesis [BR:
sfm03009
]
108919758
04131 Membrane trafficking [BR:
sfm04131
]
108919758
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfm04147
]
108919758
Messenger RNA biogenesis [BR:
sfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108919758
Ribosome biogenesis [BR:
sfm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
108919758
Membrane trafficking [BR:
sfm04131
]
SNARE
SNARE associated proteins
Others
108919758
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108919758
Exosome [BR:
sfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108919758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_22
TIP49
RNA_helicase
AAA_28
AAA_14
NPHP3_N
Vps4_C
nSTAND3
Mg_chelatase
Parvo_NS1
AAA_17
ATPase_2
AAA_18
ATPase
IstB_IS21
AAA_7
DUF815
ABC_tran
AAA_24
ResIII
Viral_helicase1
Sigma54_activat
TsaE
NACHT
NB-ARC
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
108919758
NCBI-ProteinID:
XP_018583527
UniProt:
A0A8C9SCT8
LinkDB
All DBs
Position
1:complement(963268..973717)
Genome browser
AA seq
808 aa
AA seq
DB search
MPASGRTDPKGEDYSTAILKQKHRPNRLIVDEALNEDNSIVCLSQQKMEELQLFRGDTVI
LRGRKRRQTVCIVLTDDTCADERVRMNRVTRNNLRVRLGDVISIQACPDVKYGKRIHVLP
IDDTIEGLTGNLFEVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVAP
DTIIHCEGEPIKREDEEESLNDVGYDDIGGCRKQLAQIKEMVELPLRHPGLFKTIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSDDVDLERISTETHGHVGADLAALCSEA
ALQAIRKKMILIDLEDDTIDADVLNSLAVTMDDFRWALGQSNPSALRETVVEVPQVNWED
IGGLDDVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDAGGAAD
RVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRSAILS
ANLRKSPIARDVDLEYIARITEGFSGADLTEICQRACKLAIREAIEAEIRMERQRQTHPD
TAMDEDYDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGSQ
PSGGQGSGQGGRDPGNLYRDNGDDDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccagcctctgggaggacagaccccaagggggaggactactccaccgccatcctgaaa
cagaagcatagacccaaccgactcattgtggacgaagctctcaatgaagacaacagcatc
gtgtgcctctctcagcaaaagatggaagagctgcagctcttccggggcgacacagtcatc
ctccgtggccgcaagcggaggcagaccgtctgcatcgtgctgacagacgacacctgcgcc
gatgaacgagtgcggatgaatcgcgtcacacgcaacaatctgcgcgttcgtcttggtgat
gtcatcagcatccaggcatgtccagatgtgaagtacggcaagcggatccacgtgttgccc
atcgacgacaccattgaggggctgacaggaaacctgttcgaagtgttcctcaaaccctat
ttcctggaagcctatcgacctgtacacaaaggggacatcttcctggtgcgggggggcatg
cgagcggtggagttcaaggtggtggagacggatcccaccccgcactgcatcgtcgccccc
gacaccatcattcactgtgagggcgagccaatcaagagagaggacgaggaggagagcctc
aatgatgttggctatgacgacatcggcggttgccgaaagcagctggcccaaatcaaggag
atggtggagctccccctgcgacaccctggtctcttcaaaactattggcgtgaagccgcca
cgagggatcctattatatggccccccaggaaccggaaaaaccctggtggcccgcgctgtc
gccaatgagactggagcttttttcttcctcatcaatgggcctgagatcatgagcaaactg
gcaggagagtcagagagcaacctccgcaaagcctttgaagaagctgagaagaatgcaccc
gctatcatcttcatagacgagctggatgccatcgcacccaagagagagaaaacacatggg
gaggtggagaggagaatcgtctctcagctcttgaccttgatggatggcttgaagcagcgc
tctcacgtcatcgtcatggcggccaccaaccggcccaacagcgtggaccctgccctgcga
cgcttcgggaggtttgaccgggaaattgacattggcatccccgactccaccggacgtcta
gagatcctacagatccacacaaagaacatgaagctgtccgacgatgtggatttggagagg
atctccacggagacacacggtcacgtcggggccgacctggcagctctgtgctcggaagct
gctctgcaagccatccgtaaaaagatgatcctcatcgatctggaggatgacaccatcgac
gcagatgtgctcaactctcttgctgtcaccatggacgacttccggtgggctctggggcag
agcaacccctctgccctgagggagacggtggtggaggttccccaggtcaactgggaggat
atcggtggtctggacgatgtgaagcgggaacttcaagagttggtgcagtacccggtggag
tatccagacaaattcctgaagtttgggatgaccccatctcgtggtgtattattctatggt
ccccctggctgtggcaaaaccctgctggccaaggctattgccaatgagtgccaggccaac
tttgtgtccatcaagggtcccgagctgctgaccatgtggtttggcgagtctgaagccaat
gtccgagatgtttttgacaaggctcgacaagctgccccctgcattctcttcttcgatgag
ttggactccatcgctaaagcccgtgggggtggagctggagatgcagggggtgcagcagac
cgggtcatcaaccagatcctgaccgaaatggatggcatgaccaacaagaagaatgttttc
atcatcggtgccaccaacaggcccgacatcattgaccctgccatcctgcgcccaggccgt
ctggaccaactgatctacatccccctgcccgacctgccgtcccgcagtgctattctttct
gccaacctgcgcaagtcacctatcgcccgcgatgtggacctggagtacatcgcccgcatc
acagagggcttctctggagcagacctaacggagatctgccaacgcgcatgcaagctggcc
atccgggaagccatcgaggcagagatccgcatggagcggcaacggcagactcatccagac
accgccatggatgaagactacgacccggtcccagaaatccggaaggatcattttgaggaa
gccatgcgctttgcccgtcgctccgtcagtgacaatgacatccgcaaatacgagatgttc
gcccagacactgcagcagagtcgaggcttcggcaacttcaggttcccttcggggtcacag
cccagcggtggtcaagggtctgggcagggcggcagggatcctggtaacttgtacagggac
aacggagatgacgacctttaccagtga
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